RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.53■□□□□ 0.087e-11■■■■■ 260.8
CACNA1A-209ENST00000587525 DIXDC1Q155Q3 683 aa15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 RASSF4Q9H2L5 321 aa15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 ATG3Q9NT62 314 aa15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 TFR2Q9UP52 801 aa15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 SPA17Q15506 151 aa15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 IQUBQ8NA54 791 aa15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 ANKRD7Q92527 254 aa15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 USP42Q9H9J4 1324 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-209ENST00000587525 PP2D1A8MPX8 630 aa15.52■□□□□ 0.08
CACNA1A-209ENST00000587525 EIF3JO75822 258 aaKnown RBP15.52■□□□□ 0.08
CACNA1A-209ENST00000587525 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
CACNA1A-209ENST00000587525 CCDC122Q5T0U0 273 aa15.52■□□□□ 0.08
CACNA1A-209ENST00000587525 USPL1Q5W0Q7 1092 aa15.52■□□□□ 0.08
CACNA1A-209ENST00000587525 ATL3Q6DD88 541 aa15.52■□□□□ 0.08
CACNA1A-209ENST00000587525 CTAGE9A4FU28 777 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 TRIM66O15016 1216 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 PNMA6AP0CW24 399 aaPredicted RBP15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 CCZ1BP86790 482 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 CCZ1P86791 482 aaPredicted RBP15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 SLC44A5Q8NCS7 719 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 CTAGE15A4D2H0 777 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 SLFN14P0C7P3 912 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 CTAGE8P0CG41 777 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 ST5P78524 1137 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 RBL2Q08999 1139 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 CTAGE6Q86UF2 777 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 CTAGE4Q8IX94 777 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 TXLNBQ8N3L3 684 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 WDR24Q96S15 920 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 FAM207AQ9NSI2 230 aaPredicted RBP15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 HPS5Q9UPZ3 1129 aa15.52■□□□□ 0.07
CACNA1A-209ENST00000587525 A0A1W2PQ27 194 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 A0A1W2PQ64 194 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 A0A1W2PQD8 194 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 KCNQ2O43526 872 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 USP17L8P0C7I0 530 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 FMR1Q06787 632 aaKnown RBP eCLIP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 BRINP3Q76B58 766 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 TMTC2Q8N394 836 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 ZNF335Q9H4Z2 1342 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 ARHGAP6O43182 974 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 DTHD1Q6ZMT9 781 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 ILDR1Q86SU0 546 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 MICALL1Q8N3F8 863 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 GOLGA1Q92805 767 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 ZNF622Q969S3 477 aaKnown RBP eCLIP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 SRP68Q9UHB9 627 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 UBR1Q8IWV7 1749 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 METTL16Q86W50 562 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 CCDC148Q8NFR7 591 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 NELFBQ8WX92 580 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 BCCIPQ9P287 314 aaKnown RBP eCLIP15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 GDAQ9Y2T3 454 aa15.51■□□□□ 0.07
CACNA1A-209ENST00000587525 ATP2C2O75185 946 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 TBC1D8BQ0IIM8 1120 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 EXOC1Q9NV70 894 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 CCDC87Q9NVE4 849 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 LUC7L2Q9Y383 392 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 TECPR2O15040 1411 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 KIF5BP33176 963 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 CCDC40Q4G0X9 1142 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 KANK3Q6NY19 840 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 TRIM49BA6NDI0 452 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 CCNT1O60563 726 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 PRDX5P30044 214 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 CYP27A1Q02318 531 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 RGS22Q8NE09 1264 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 ACBD3Q9H3P7 528 aa15.5■□□□□ 0.07
CACNA1A-209ENST00000587525 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 RFC4P35249 363 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 RBM6P78332 1123 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 TTC19Q6DKK2 380 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 NLRC4Q9NPP4 1024 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 BIN2Q9UBW5 565 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 NOP2P46087 812 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 PDE4DQ08499 809 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 E2F4Q16254 413 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 MLKLQ8NB16 471 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 ZSCAN10Q96SZ4 725 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 LY9Q9HBG7 655 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 PPP1R1BQ9UD71 204 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 FRMPD2Q68DX3 1309 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 NELFCDQ8IXH7 590 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 ENGASEQ8NFI3 743 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 NKX2-3Q8TAU0 364 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 PDE11AQ9HCR9 933 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 IMPACTQ9P2X3 320 aa15.49■□□□□ 0.07
CACNA1A-209ENST00000587525 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 MNAT1P51948 309 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms