RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 CNMDO75829 334 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 VCAM1P19320 739 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 GUCY1A2P33402 732 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 HSP90AB4PQ58FF6 505 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 GPR142Q7Z601 462 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 TTC6Q86TZ1 520 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 KIF1BPQ96EK5 621 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 RPTORQ8N122 1335 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 RLFQ13129 1914 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 EVI5O60447 810 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 POLR3DP05423 398 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 MNX1P50219 401 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 SEPT2Q15019 361 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 C20orf194Q5TEA3 1177 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 CERS3Q8IU89 383 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 ARMT1Q9H993 441 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 MCM9Q9NXL9 1143 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 NR2E3Q9Y5X4 410 aa18.43■□□□□ 0.54
PRKCSH-204ENST00000587290 MAPK4P31152 587 aa18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 GABPAQ06546 454 aa18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 TTF1Q15361 905 aaPredicted RBP18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 CLEC10AQ8IUN9 316 aa18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 CCAR1Q8IX12 1150 aaKnown RBP18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 SOCS4Q8WXH5 440 aa18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 CRNKL1Q9BZJ0 848 aaKnown RBP18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 PRO3102Q9H379 93 aa18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 BOLA2Q9H3K6 86 aa18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 DDX19BQ9UMR2 479 aa18.42■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L15C9J2P7 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L13C9JLJ4 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L11C9JVI0 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L18D6R9N7 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L22D6RA61 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L17D6RBQ6 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L19D6RCP7 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L20D6RJB6 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 MPHOSPH10O00566 681 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 PRKAB2O43741 272 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 CCND3P30281 292 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP17L24Q0WX57 530 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 MAP3K21Q5TCX8 1036 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 WDR78Q5VTH9 848 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 NECAB2Q7Z6G3 386 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 PLEKHH3Q7Z736 793 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 C7orf61Q8IZ16 206 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 USP6NLQ92738 828 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 DYNLL2Q96FJ2 89 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 KIAA1683Q9H0B3 1180 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 RPAP3Q9H6T3 665 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 DCP1AQ9NPI6 582 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 BTBD7Q9P203 1132 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 PARP14Q460N5 1801 aa18.41■□□□□ 0.54
PRKCSH-204ENST00000587290 A0A0G2JMZ2 1700 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 CYP2D7A0A087X1C5 515 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 A0A1W2PRG0 241 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 HMMRO75330 724 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 MBD4O95243 580 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 MORN1Q5T089 497 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 CATSPERGQ6ZRH7 1159 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 CWC22Q9HCG8 908 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 CABP5Q9NP86 173 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 STAP2Q9UGK3 403 aa18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-204ENST00000587290 COL11A1P12107 1806 aaPredicted RBP18.39■□□□□ 0.54
PRKCSH-204ENST00000587290 SPDYE16A6NNV3 312 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 SMARCA5O60264 1052 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 MS4A1P11836 297 aa18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 KIAA1755Q5JYT7 1200 aa18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 PAG1Q9NWQ8 432 aa18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 FLRT1Q9NZU1 646 aa18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 RCAN3Q9UKA8 241 aa18.39■□□□□ 0.53
PRKCSH-204ENST00000587290 XRCC5P13010 732 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 ADD2P35612 726 aa18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 RGS2P41220 211 aa18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 USP14P54578 494 aa18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 GTF3C2Q8WUA4 911 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 APBA2Q99767 749 aa18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 OGDHLQ9ULD0 1010 aa18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 RABGAP1Q9Y3P9 1069 aa18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 PFASO15067 1338 aa18.38■□□□□ 0.53
PRKCSH-204ENST00000587290 RAB11FIP3O75154 756 aa18.37■□□□□ 0.53
PRKCSH-204ENST00000587290 SYN1P17600 705 aa18.37■□□□□ 0.53
PRKCSH-204ENST00000587290 MAP2K5Q13163 448 aa18.37■□□□□ 0.53
PRKCSH-204ENST00000587290 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
PRKCSH-204ENST00000587290 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
PRKCSH-204ENST00000587290 C11orf49Q9H6J7 331 aa18.37■□□□□ 0.53
PRKCSH-204ENST00000587290 SOX1O00570 391 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms