RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 EHD4Q9H223 541 aa17.32■□□□□ 0.36
CXXC1-208ENST00000587170 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
CXXC1-208ENST00000587170 HLA-DOAP06340 250 aa17.31■□□□□ 0.36
CXXC1-208ENST00000587170 TTC39AQ5SRH9 613 aa17.31■□□□□ 0.36
CXXC1-208ENST00000587170 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
CXXC1-208ENST00000587170 CERS3Q8IU89 383 aa17.31■□□□□ 0.36
CXXC1-208ENST00000587170 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
CXXC1-208ENST00000587170 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
CXXC1-208ENST00000587170 TRIM34Q9BYJ4 488 aa17.31■□□□□ 0.36
CXXC1-208ENST00000587170 SLC15A5A6NIM6 579 aa17.3■□□□□ 0.36
CXXC1-208ENST00000587170 GH2P01242 217 aa17.3■□□□□ 0.36
CXXC1-208ENST00000587170 CCNA1P78396 465 aa17.3■□□□□ 0.36
CXXC1-208ENST00000587170 CCDC158Q5M9N0 1113 aa17.3■□□□□ 0.36
CXXC1-208ENST00000587170 SSH3Q8TE77 659 aa17.3■□□□□ 0.36
CXXC1-208ENST00000587170 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
CXXC1-208ENST00000587170 PIH1D3Q9NQM4 214 aaKnown RBP17.3■□□□□ 0.36
CXXC1-208ENST00000587170 FLRT1Q9NZU1 646 aa17.3■□□□□ 0.36
CXXC1-208ENST00000587170 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 POTEB2H3BUK9 544 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
CXXC1-208ENST00000587170 MSCO60682 206 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 GLRX3O76003 335 aaKnown RBP17.29■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 GRB14Q14449 540 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 TMED8Q6PL24 325 aaPredicted RBP17.29■□□□□ 0.36
CXXC1-208ENST00000587170 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
CXXC1-208ENST00000587170 SAP30BPQ9UHR5 308 aaKnown RBP17.29■□□□□ 0.36
CXXC1-208ENST00000587170 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
CXXC1-208ENST00000587170 VCAM1P19320 739 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 PTPREP23469 700 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 ZAP70P43403 619 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 USP14P54578 494 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 DYNLL1P63167 89 aaKnown RBP17.28■□□□□ 0.36
CXXC1-208ENST00000587170 CATSPERGQ6ZRH7 1159 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 LPAR1Q92633 364 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
CXXC1-208ENST00000587170 GUCD1Q96NT3 240 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 DDX20Q9UHI6 824 aaKnown RBP17.28■□□□□ 0.36
CXXC1-208ENST00000587170 SERPINB13Q9UIV8 391 aa17.28■□□□□ 0.36
CXXC1-208ENST00000587170 DBNLQ9UJU6 430 aaKnown RBP17.28■□□□□ 0.36
CXXC1-208ENST00000587170 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
CXXC1-208ENST00000587170 DNM1LO00429 736 aa17.27■□□□□ 0.36
CXXC1-208ENST00000587170 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
CXXC1-208ENST00000587170 MFSD14CQ5VZR4 134 aa17.27■□□□□ 0.36
CXXC1-208ENST00000587170 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
CXXC1-208ENST00000587170 CYBAP13498 195 aa17.26■□□□□ 0.35
CXXC1-208ENST00000587170 FEZ1Q99689 392 aa17.26■□□□□ 0.35
CXXC1-208ENST00000587170 BTBD7Q9P203 1132 aa17.26■□□□□ 0.35
CXXC1-208ENST00000587170 NOP58Q9Y2X3 529 aaKnown RBP17.26■□□□□ 0.35
CXXC1-208ENST00000587170 CYP7A1P22680 504 aa17.25■□□□□ 0.35
CXXC1-208ENST00000587170 TRPV1Q8NER1 839 aa17.25■□□□□ 0.35
CXXC1-208ENST00000587170 TLR7Q9NYK1 1049 aaKnown RBP17.25■□□□□ 0.35
CXXC1-208ENST00000587170 SHMT1P34896 483 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 ZYXQ15942 572 aaKnown RBP17.24■□□□□ 0.35
CXXC1-208ENST00000587170 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 OLFML2BQ68BL8 750 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 NPLOC4Q8TAT6 608 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 ACER1Q8TDN7 264 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 COL25A1Q9BXS0 654 aaPredicted RBP17.24■□□□□ 0.35
CXXC1-208ENST00000587170 SENP6Q9GZR1 1112 aaPredicted RBP17.24■□□□□ 0.35
CXXC1-208ENST00000587170 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
CXXC1-208ENST00000587170 IVNS1ABPQ9Y6Y0 642 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 CHD9Q3L8U1 2897 aa17.24■□□□□ 0.35
CXXC1-208ENST00000587170 BCAR3O75815 825 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 GUCY1A2P33402 732 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 GABPAQ06546 454 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 SNX17Q15036 470 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
CXXC1-208ENST00000587170 TTC6Q86TZ1 520 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.23■□□□□ 0.35
CXXC1-208ENST00000587170 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 MIGA1Q8NAN2 632 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
CXXC1-208ENST00000587170 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
CXXC1-208ENST00000587170 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
CXXC1-208ENST00000587170 MCM3APO60318 1980 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
CXXC1-208ENST00000587170 IDH1O75874 414 aaKnown RBP17.22■□□□□ 0.35
CXXC1-208ENST00000587170 CYP2C19P33261 490 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 USP5P45974 858 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 RTP1P59025 263 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
CXXC1-208ENST00000587170 RAB3GAP1Q15042 981 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 MAGEB6Q8N7X4 407 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 SHCBP1Q8NEM2 672 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
CXXC1-208ENST00000587170 RPAP3Q9H6T3 665 aaPredicted RBP17.22■□□□□ 0.35
CXXC1-208ENST00000587170 NDUFB9Q9Y6M9 179 aa17.22■□□□□ 0.35
CXXC1-208ENST00000587170 MYH4Q9Y623 1939 aa17.21■□□□□ 0.35
CXXC1-208ENST00000587170 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms