RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 CTU1Q7Z7A3 348 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 ZNF589Q86UQ0 364 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 ACER1Q8TDN7 264 aa17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 KIAA1683Q9H0B3 1180 aa17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 KANSL2Q9H9L4 492 aa17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 ARHGEF10LQ9HCE6 1279 aa17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 CPA4Q9UI42 421 aa17.27■□□□□ 0.36
SMARCA4-212ENST00000586985 MYH1P12882 1939 aa17.27■□□□□ 0.35
SMARCA4-212ENST00000586985 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.35
SMARCA4-212ENST00000586985 FOXP2O15409 715 aa17.26■□□□□ 0.35
SMARCA4-212ENST00000586985 PRDM1O75626 825 aa17.26■□□□□ 0.35
SMARCA4-212ENST00000586985 RASA1P20936 1047 aa17.26■□□□□ 0.35
SMARCA4-212ENST00000586985 ATP2B2Q01814 1243 aa17.26■□□□□ 0.35
SMARCA4-212ENST00000586985 C17orf99Q6UX52 265 aa17.26■□□□□ 0.35
SMARCA4-212ENST00000586985 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
SMARCA4-212ENST00000586985 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
SMARCA4-212ENST00000586985 HOXA7P31268 230 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 ICA1Q05084 483 aa17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 CTDSPL2Q05D32 466 aa17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 CD99L2Q8TCZ2 262 aa17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 SIPA1L1O43166 1804 aa17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 MYH7P12883 1935 aa17.25■□□□□ 0.35
SMARCA4-212ENST00000586985 DOCK1Q14185 1865 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 NAV1Q8NEY1 1877 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 CHMLP26374 656 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 PKN2Q16513 984 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 C12orf42Q96LP6 360 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 MCOLN1Q9GZU1 580 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 ASCC2Q9H1I8 757 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 TRIM17Q9Y577 477 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 ROBO3Q96MS0 1386 aa17.24■□□□□ 0.35
SMARCA4-212ENST00000586985 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 ZNF213O14771 459 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 GCLCP48506 637 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 TFAP4Q01664 338 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 P2RX7Q99572 595 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 CTNNA3Q9UI47 895 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 TMX2Q9Y320 296 aa17.23■□□□□ 0.35
SMARCA4-212ENST00000586985 CLEC10AQ8IUN9 316 aa17.22■□□□□ 0.35
SMARCA4-212ENST00000586985 NEDD1Q8NHV4 660 aa17.22■□□□□ 0.35
SMARCA4-212ENST00000586985 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
SMARCA4-212ENST00000586985 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMARCA4-212ENST00000586985 ZMYM6O95789 1325 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 DDX60LQ5H9U9 1706 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 BCRP11274 1271 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 HAND2P61296 217 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 LPAR1Q92633 364 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 NYAP2Q9P242 653 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 CLIP2Q9UDT6 1046 aa17.21■□□□□ 0.35
SMARCA4-212ENST00000586985 RAD50Q92878 1312 aa17.21■□□□□ 0.34
SMARCA4-212ENST00000586985 ADGRA2Q96PE1 1338 aa17.21■□□□□ 0.34
SMARCA4-212ENST00000586985 TSPY2A6NKD2 308 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 RAD21O60216 631 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 FMNL1O95466 1100 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 GNRH1P01148 92 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 VCAM1P19320 739 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 HOXD10P28358 340 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 RRP12Q5JTH9 1297 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 PPP4R3BQ5MIZ7 849 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 CATSPERGQ6ZRH7 1159 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 OTOP1Q7RTM1 612 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 ANKRD13CQ8N6S4 541 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 RNF41Q9H4P4 317 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 RPAP3Q9H6T3 665 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 GOPCQ9HD26 462 aa17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMARCA4-212ENST00000586985 ORC4O43929 436 aa17.19■□□□□ 0.34
SMARCA4-212ENST00000586985 FGRP09769 529 aa17.19■□□□□ 0.34
SMARCA4-212ENST00000586985 PCP11498 1178 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-212ENST00000586985 PSMC4P43686 418 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms