RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 AOC3Q16853 763 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 FOXP1Q9H334 677 aaPredicted RBP25.77■■□□□ 1.72
CIRBP-208ENST00000586548 PICALMQ13492 652 aa25.76■■□□□ 1.71
CIRBP-208ENST00000586548 PKN1Q16512 942 aa25.76■■□□□ 1.71
CIRBP-208ENST00000586548 APOBEC3HQ6NTF7 200 aaKnown RBP25.76■■□□□ 1.71
CIRBP-208ENST00000586548 CDC42EP5Q6NZY7 148 aa25.76■■□□□ 1.71
CIRBP-208ENST00000586548 PNMA1Q8ND90 353 aa25.76■■□□□ 1.71
CIRBP-208ENST00000586548 NEDD1Q8NHV4 660 aa25.76■■□□□ 1.71
CIRBP-208ENST00000586548 ZDHHC15Q96MV8 337 aa25.76■■□□□ 1.71
CIRBP-208ENST00000586548 CLSTN2Q9H4D0 955 aa25.76■■□□□ 1.71
CIRBP-208ENST00000586548 C21orf2O43822 256 aa25.75■■□□□ 1.71
CIRBP-208ENST00000586548 NOSTRINQ8IVI9 506 aa25.75■■□□□ 1.71
CIRBP-208ENST00000586548 DIS3L2Q8IYB7 885 aaKnown RBP25.75■■□□□ 1.71
CIRBP-208ENST00000586548 TAOK2Q9UL54 1235 aa25.75■■□□□ 1.71
CIRBP-208ENST00000586548 SPTLC2O15270 562 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 NR1I2O75469 434 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 CCDC93Q567U6 631 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 ADALQ6DHV7 355 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 CCAR1Q8IX12 1150 aaKnown RBP25.74■■□□□ 1.71
CIRBP-208ENST00000586548 SRBD1Q8N5C6 995 aaKnown RBP25.74■■□□□ 1.71
CIRBP-208ENST00000586548 DDX4Q9NQI0 724 aaKnown RBP25.74■■□□□ 1.71
CIRBP-208ENST00000586548 PCDHA7Q9UN72 937 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 PSME4Q14997 1843 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 A0A1W2PQ27 194 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 A0A1W2PQ64 194 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 A0A1W2PQD8 194 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 GABPAQ06546 454 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 SF3A1Q15459 793 aaKnown RBP25.74■■□□□ 1.71
CIRBP-208ENST00000586548 MAP3K11Q16584 847 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 RTKN2Q8IZC4 609 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 FUCA2Q9BTY2 467 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 KCNJ14Q9UNX9 436 aa25.74■■□□□ 1.71
CIRBP-208ENST00000586548 V9GY48 417 aaPredicted RBP25.74■■□□□ 1.71
CIRBP-208ENST00000586548 MYH8P13535 1937 aa25.73■■□□□ 1.71
CIRBP-208ENST00000586548 PPIP5K2O43314 1243 aa25.73■■□□□ 1.71
CIRBP-208ENST00000586548 GRM4Q14833 912 aa25.73■■□□□ 1.71
CIRBP-208ENST00000586548 SLC39A14Q15043 492 aa25.73■■□□□ 1.71
CIRBP-208ENST00000586548 CCDC73Q6ZRK6 1079 aa25.73■■□□□ 1.71
CIRBP-208ENST00000586548 OSBPL5Q9H0X9 879 aaPredicted RBP25.73■■□□□ 1.71
CIRBP-208ENST00000586548 TNMDQ9H2S6 317 aa25.73■■□□□ 1.71
CIRBP-208ENST00000586548 PLIN4Q96Q06 1357 aa25.73■■□□□ 1.71
CIRBP-208ENST00000586548 BTBD18B2RXH4 712 aa25.72■■□□□ 1.71
CIRBP-208ENST00000586548 GNAQP50148 359 aa25.72■■□□□ 1.71
CIRBP-208ENST00000586548 KIAA0825Q8IV33 1275 aa25.72■■□□□ 1.71
CIRBP-208ENST00000586548 ANP32BQ92688 251 aaKnown RBP25.72■■□□□ 1.71
CIRBP-208ENST00000586548 PSMD1Q99460 953 aa25.72■■□□□ 1.71
CIRBP-208ENST00000586548 RBM43Q6ZSC3 357 aaKnown RBP25.71■■□□□ 1.71
CIRBP-208ENST00000586548 TMEM47Q9BQJ4 181 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 MYO3BQ8WXR4 1341 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 DPEP1P16444 411 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 KCNA3P22001 575 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 FSIP1Q8NA03 581 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 MRPS27Q92552 414 aaKnown RBP25.71■■□□□ 1.71
CIRBP-208ENST00000586548 PHF20Q9BVI0 1012 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 GOLPH3LQ9H4A5 285 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 SWAP70Q9UH65 585 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 SERPINA10Q9UK55 444 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 STX8Q9UNK0 236 aa25.71■■□□□ 1.71
CIRBP-208ENST00000586548 NOVP48745 357 aa25.7■■□□□ 1.7
CIRBP-208ENST00000586548 FAM160A1Q05DH4 1040 aa25.7■■□□□ 1.7
CIRBP-208ENST00000586548 VPS54Q9P1Q0 977 aa25.7■■□□□ 1.7
CIRBP-208ENST00000586548 PPP6R2O75170 966 aa25.69■■□□□ 1.7
CIRBP-208ENST00000586548 JMYQ8N9B5 988 aa25.69■■□□□ 1.7
CIRBP-208ENST00000586548 ENGASEQ8NFI3 743 aa25.69■■□□□ 1.7
CIRBP-208ENST00000586548 SHISA4Q96DD7 197 aa25.69■■□□□ 1.7
CIRBP-208ENST00000586548 SERPINB13Q9UIV8 391 aa25.69■■□□□ 1.7
CIRBP-208ENST00000586548 HLA-DOAP06340 250 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 CCDC192P0DO97 292 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 PTPAQ15257 358 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 CAMK4Q16566 473 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 MAD2L2Q9UI95 211 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 hCG_1642624A0A1W2PR95 340 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 SCG2P13521 617 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 SNW1Q13573 536 aaKnown RBP25.68■■□□□ 1.7
CIRBP-208ENST00000586548 PFKFB3Q16875 520 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-208ENST00000586548 RILPL1Q5EBL4 403 aa25.68■■□□□ 1.7
CIRBP-208ENST00000586548 YDJCA8MPS7 323 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 CTAGE5O15320 804 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 NPM3O75607 178 aaKnown RBP25.67■■□□□ 1.7
CIRBP-208ENST00000586548 TOP1P11387 765 aaKnown RBP25.67■■□□□ 1.7
CIRBP-208ENST00000586548 KRT2P35908 639 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 CCDC173Q0VFZ6 552 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 RNF214Q8ND24 703 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 LZTS2Q9BRK4 669 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 IDI2Q9BXS1 227 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 EHD4Q9H223 541 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 BRMS1Q9HCU9 246 aa25.67■■□□□ 1.7
CIRBP-208ENST00000586548 RBM5P52756 815 aaKnown RBP eCLIP25.66■■□□□ 1.72e-12■□□□□ 8.3
CIRBP-208ENST00000586548 NFIAQ12857 509 aa25.66■■□□□ 1.7
CIRBP-208ENST00000586548 NR5A1Q13285 461 aa25.66■■□□□ 1.7
CIRBP-208ENST00000586548 AXDND1Q5T1B0 1012 aaPredicted RBP25.66■■□□□ 1.7
CIRBP-208ENST00000586548 SOGA3Q5TF21 947 aa25.66■■□□□ 1.7
CIRBP-208ENST00000586548 OXER1Q8TDS5 423 aa25.66■■□□□ 1.7
CIRBP-208ENST00000586548 CEP95Q96GE4 821 aa25.66■■□□□ 1.7
CIRBP-208ENST00000586548 VPS33BQ9H267 617 aa25.66■■□□□ 1.7
CIRBP-208ENST00000586548 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.66■■□□□ 1.7
CIRBP-208ENST00000586548 KINO60870 393 aaKnown RBP25.66■■□□□ 1.7
CIRBP-208ENST00000586548 STAG2Q8N3U4 1231 aa25.66■■□□□ 1.7
CIRBP-208ENST00000586548 PALM3A6NDB9 673 aaPredicted RBP25.65■■□□□ 1.7
CIRBP-208ENST00000586548 UVSSAQ2YD98 709 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms