RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SPATA31A6Q5VVP1 1343 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 CBFA2T2O43439 604 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 CALML3P27482 149 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 STAT6P42226 847 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 PTGDRQ13258 359 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 INF2Q27J81 1249 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 RRP36Q96EU6 259 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 RNF26Q9BY78 433 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 TCHHQ07283 1943 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 A0A1W2PQ27 194 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 A0A1W2PQ64 194 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 A0A1W2PQD8 194 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 GYS1P13807 737 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 ARID5BQ14865 1188 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 GRIK5Q16478 980 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 TSR1Q2NL82 804 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 CLEC10AQ8IUN9 316 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 FNBP4Q8N3X1 1017 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 PDLIM2Q96JY6 352 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 XPO4Q9C0E2 1151 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 FOXN1O15353 648 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 NLRP12P59046 1061 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 PPFIBP1Q86W92 1011 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 STAG2Q8N3U4 1231 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 KRT18P05783 430 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 SLC10A5Q5PT55 438 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 FMR1NBQ8N0W7 255 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 PARP4Q9UKK3 1724 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 DISP2A7MBM2 1401 aa14.18□□□□□ -0.14
SMARCA4-208ENST00000585799 PLCD1P51178 756 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 MYL5Q02045 173 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 POSTNQ15063 836 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 ILDR1Q86SU0 546 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 TCP11L1Q9NUJ3 509 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 ROBO1Q9Y6N7 1651 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 TPM2P07951 284 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 PTPN14Q15678 1187 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 KRBA2Q6ZNG9 492 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 TBC1D22AQ8WUA7 517 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 EEF2KMTQ96G04 330 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 BIN2Q9UBW5 565 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 CLSTN1O94985 981 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 FANCCQ00597 558 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 GRIN1Q05586 938 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 SMYD4Q8IYR2 804 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 CCDC112Q8NEF3 446 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 CTDP1Q9Y5B0 961 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 COL18A1P39060 1754 aa14.17□□□□□ -0.14
SMARCA4-208ENST00000585799 CDK8P49336 464 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 ZYXQ15942 572 aaKnown RBP14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 DTHD1Q6ZMT9 781 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 USP49Q70CQ1 688 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 CCDC178Q5BJE1 867 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 SHC4Q6S5L8 630 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 WDR19Q8NEZ3 1342 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 ALDH1B1P30837 517 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 GOLGA8FQ08AF8 430 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 GOLGA8DPQ0D2H9 430 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 TMTC3Q6ZXV5 915 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 BLIDQ8IZY5 108 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 SRBD1Q8N5C6 995 aaKnown RBP14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 TBC1D16Q8TBP0 767 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 C6orf50Q9HD87 102 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 NFE2L3Q9Y4A8 694 aa14.16□□□□□ -0.14
SMARCA4-208ENST00000585799 CCNT1O60563 726 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 KANK3Q6NY19 840 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 TDRD7Q8NHU6 1098 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 CCDC12Q8WUD4 166 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 SYMPKQ92797 1274 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 FOXP1Q9H334 677 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 AP5Z1O43299 807 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 DDAH1O94760 285 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 ATP1A3P13637 1013 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 SLC16A2P36021 539 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 ZNF76P36508 570 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 PPP2R5BQ15173 497 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 TEKT1Q969V4 418 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 FAM217BQ9NTX9 383 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 FANCLQ9NW38 375 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 SMCO2A6NFE2 343 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 ERCC3P19447 782 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 CHRNA5P30532 468 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 PDE6BP35913 854 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 TXKP42681 527 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 GLIPR1L2Q4G1C9 344 aa14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 NOC3LQ8WTT2 800 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-208ENST00000585799 PPIP5K2O43314 1243 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 BMP15O95972 392 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 STIM1Q13586 685 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 NOM1Q5C9Z4 860 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 IQUBQ8NA54 791 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 STK32BQ9NY57 414 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 V9GYY5 206 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 ARFGEF2Q9Y6D5 1785 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 NTRK3Q16288 839 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms