RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 SMCR8Q8TEV9 937 aaPredicted RBP27.57■■■□□ 2
LSM7-202ENST00000585395 SHISA4Q96DD7 197 aa27.57■■■□□ 2
LSM7-202ENST00000585395 TMOD4Q9NZQ9 345 aa27.57■■■□□ 2
LSM7-202ENST00000585395 ZSWIM8A7E2V4 1837 aa27.56■■■□□ 2
LSM7-202ENST00000585395 HMGCS2P54868 508 aa27.56■■■□□ 2
LSM7-202ENST00000585395 PABPC4Q13310 644 aaKnown RBP eCLIP27.56■■■□□ 28e-9■■■■□ 23
LSM7-202ENST00000585395 GPAT2Q6NUI2 795 aa27.56■■■□□ 2
LSM7-202ENST00000585395 SLC17A8Q8NDX2 589 aa27.56■■■□□ 2
LSM7-202ENST00000585395 ARPP21Q9UBL0 812 aaPredicted RBP27.56■■■□□ 2
LSM7-202ENST00000585395 PNMA3Q9UL41 463 aa27.56■■■□□ 2
LSM7-202ENST00000585395 AGTPBP1Q9UPW5 1226 aa27.56■■■□□ 2
LSM7-202ENST00000585395 MYH8P13535 1937 aa27.56■■■□□ 2
LSM7-202ENST00000585395 A0A0C4DFX4 3053 aa27.55■■■□□ 2
LSM7-202ENST00000585395 PATL2C9JE40 543 aaKnown RBP27.55■■■□□ 2
LSM7-202ENST00000585395 ECM2O94769 699 aaPredicted RBP27.55■■■□□ 2
LSM7-202ENST00000585395 GH2P01242 217 aa27.55■■■□□ 2
LSM7-202ENST00000585395 CYP2C8P10632 490 aa27.55■■■□□ 2
LSM7-202ENST00000585395 RAB3GAP1Q15042 981 aa27.55■■■□□ 2
LSM7-202ENST00000585395 ABCB5Q2M3G0 1257 aa27.55■■■□□ 2
LSM7-202ENST00000585395 PROCA1Q8NCQ7 364 aaPredicted RBP27.55■■■□□ 2
LSM7-202ENST00000585395 SEC62Q99442 399 aaKnown RBP27.55■■■□□ 2
LSM7-202ENST00000585395 HTATIP2Q9BUP3 242 aa27.55■■■□□ 2
LSM7-202ENST00000585395 MPHOSPH10O00566 681 aaKnown RBP27.54■■■□□ 2
LSM7-202ENST00000585395 TDO2P48775 406 aa27.54■■■□□ 2
LSM7-202ENST00000585395 MTMR2Q13614 643 aa27.54■■■□□ 2
LSM7-202ENST00000585395 FAM227BQ96M60 508 aa27.54■■■□□ 2
LSM7-202ENST00000585395 FEZ1Q99689 392 aa27.54■■■□□ 2
LSM7-202ENST00000585395 PRO3102Q9H379 93 aa27.54■■■□□ 2
LSM7-202ENST00000585395 SLC45A1Q9Y2W3 748 aa27.54■■■□□ 2
LSM7-202ENST00000585395 RAD50Q92878 1312 aa27.53■■■□□ 2
LSM7-202ENST00000585395 A0A0D9SFI3 127 aa27.53■■■□□ 2
LSM7-202ENST00000585395 CYP2D6P10635 497 aa27.53■■■□□ 2
LSM7-202ENST00000585395 MTFR1Q15390 333 aa27.53■■■□□ 2
LSM7-202ENST00000585395 SHROOM1Q2M3G4 852 aaPredicted RBP27.53■■■□□ 2
LSM7-202ENST00000585395 TATDN1Q6P1N9 297 aa27.53■■■□□ 2
LSM7-202ENST00000585395 CWC27Q6UX04 472 aaKnown RBP27.53■■■□□ 2
LSM7-202ENST00000585395 WDR18Q9BV38 432 aa27.53■■■□□ 2
LSM7-202ENST00000585395 CCDC171Q6TFL3 1326 aa27.52■■■□□ 2
LSM7-202ENST00000585395 USP17L10C9JJH3 530 aa27.52■■■□□ 2
LSM7-202ENST00000585395 CASC1Q6TDU7 716 aa27.52■■■□□ 2
LSM7-202ENST00000585395 UBE2Q1Q7Z7E8 422 aa27.52■■■□□ 2
LSM7-202ENST00000585395 NAPBQ9H115 298 aa27.52■■■□□ 2
LSM7-202ENST00000585395 SRRDQ9UH36 339 aa27.52■■■□□ 2
LSM7-202ENST00000585395 SWAP70Q9UH65 585 aa27.52■■■□□ 2
LSM7-202ENST00000585395 NR2E3Q9Y5X4 410 aa27.52■■■□□ 2
LSM7-202ENST00000585395 LOC285556D6RIA3 1793 aa27.52■■■□□ 2
LSM7-202ENST00000585395 GSG1L2A8MUP6 293 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 C19orf81C9J6K1 198 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 OSBPP22059 807 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 HOXD10P28358 340 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 SHMT1P34896 483 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 GJA8P48165 433 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 BACE1P56817 501 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 JAG1P78504 1218 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 TREML2Q5T2D2 321 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 C17orf99Q6UX52 265 aa27.51■■□□□ 1.99
LSM7-202ENST00000585395 USP17L12C9JPN9 530 aa27.5■■□□□ 1.99
LSM7-202ENST00000585395 USP17L21D6R901 530 aa27.5■■□□□ 1.99
LSM7-202ENST00000585395 GJB1P08034 283 aa27.5■■□□□ 1.99
LSM7-202ENST00000585395 SBK1Q52WX2 424 aa27.5■■□□□ 1.99
LSM7-202ENST00000585395 IFNL3Q8IZI9 196 aa27.5■■□□□ 1.99
LSM7-202ENST00000585395 COL6A3P12111 3177 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 SLC3A2P08195 630 aaKnown RBP27.49■■□□□ 1.99
LSM7-202ENST00000585395 GRK4P32298 578 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 PSMC4P43686 418 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 IRX3P78415 501 aaPredicted RBP27.49■■□□□ 1.99
LSM7-202ENST00000585395 SH3D19Q5HYK7 790 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 CCDC129Q6ZRS4 1044 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 RAET1EQ8TD07 263 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 DYNLL2Q96FJ2 89 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 ZNF287Q9HBT7 754 aa27.49■■□□□ 1.99
LSM7-202ENST00000585395 A0A1W2PPC1 479 aa27.48■■□□□ 1.99
LSM7-202ENST00000585395 FMNL1O95466 1100 aaPredicted RBP27.48■■□□□ 1.99
LSM7-202ENST00000585395 CHMLP26374 656 aa27.48■■□□□ 1.99
LSM7-202ENST00000585395 GABPAQ06546 454 aa27.48■■□□□ 1.99
LSM7-202ENST00000585395 ZYXQ15942 572 aaKnown RBP27.48■■□□□ 1.99
LSM7-202ENST00000585395 C12orf60Q5U649 245 aa27.48■■□□□ 1.99
LSM7-202ENST00000585395 SLC44A5Q8NCS7 719 aa27.48■■□□□ 1.99
LSM7-202ENST00000585395 TRIM47Q96LD4 638 aa27.48■■□□□ 1.99
LSM7-202ENST00000585395 ADGRA2Q96PE1 1338 aa27.47■■□□□ 1.99
LSM7-202ENST00000585395 CYP2D7A0A087X1C5 515 aa27.47■■□□□ 1.99
LSM7-202ENST00000585395 EVX2Q03828 476 aa27.47■■□□□ 1.99
LSM7-202ENST00000585395 CTR9Q6PD62 1173 aa27.47■■□□□ 1.99
LSM7-202ENST00000585395 USP17L2Q6R6M4 530 aa27.47■■□□□ 1.99
LSM7-202ENST00000585395 CUL9Q8IWT3 2517 aa27.46■■□□□ 1.99
LSM7-202ENST00000585395 CCL5P13501 91 aa27.46■■□□□ 1.99
LSM7-202ENST00000585395 CTGFP29279 349 aa27.46■■□□□ 1.99
LSM7-202ENST00000585395 SKAP1Q86WV1 359 aa27.46■■□□□ 1.99
LSM7-202ENST00000585395 MINDY4BA8MYZ0 360 aa27.45■■□□□ 1.98
LSM7-202ENST00000585395 USP14P54578 494 aa27.45■■□□□ 1.98
LSM7-202ENST00000585395 ALX1Q15699 326 aa27.45■■□□□ 1.98
LSM7-202ENST00000585395 RNF208Q9H0X6 261 aa27.45■■□□□ 1.98
LSM7-202ENST00000585395 ZMYM6O95789 1325 aa27.44■■□□□ 1.98
LSM7-202ENST00000585395 HSPD1P10809 573 aaKnown RBP27.44■■□□□ 1.98
LSM7-202ENST00000585395 BCRP11274 1271 aa27.44■■□□□ 1.98
LSM7-202ENST00000585395 CDK8P49336 464 aa27.44■■□□□ 1.98
LSM7-202ENST00000585395 FCGRTP55899 365 aa27.44■■□□□ 1.98
LSM7-202ENST00000585395 UBXN2AP68543 259 aa27.44■■□□□ 1.98
LSM7-202ENST00000585395 SEPT2Q15019 361 aa27.44■■□□□ 1.98
LSM7-202ENST00000585395 ZNF589Q86UQ0 364 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms