RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 NBPF3Q9H094 633 aa18.23■□□□□ 0.51
VAPA-209ENST00000585042 OGDHLQ9ULD0 1010 aa18.23■□□□□ 0.51
VAPA-209ENST00000585042 PLXNB2O15031 1838 aa18.23■□□□□ 0.51
VAPA-209ENST00000585042 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
VAPA-209ENST00000585042 CYP2B6P20813 491 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 RGS2P41220 211 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 CCNA1P78396 465 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 ABCB5Q2M3G0 1257 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 SHROOM1Q2M3G4 852 aaPredicted RBP18.22■□□□□ 0.51
VAPA-209ENST00000585042 MORN1Q5T089 497 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 CATSPERGQ6ZRH7 1159 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 PLEKHH3Q7Z736 793 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 KIF1BPQ96EK5 621 aa18.22■□□□□ 0.51
VAPA-209ENST00000585042 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
VAPA-209ENST00000585042 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.51
VAPA-209ENST00000585042 HMMRO75330 724 aa18.21■□□□□ 0.51
VAPA-209ENST00000585042 GPR142Q7Z601 462 aa18.21■□□□□ 0.51
VAPA-209ENST00000585042 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
VAPA-209ENST00000585042 FEZ1Q99689 392 aa18.21■□□□□ 0.51
VAPA-209ENST00000585042 CRNKL1Q9BZJ0 848 aaKnown RBP18.21■□□□□ 0.51
VAPA-209ENST00000585042 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
VAPA-209ENST00000585042 ZKSCAN1P17029 563 aaPredicted RBP18.2■□□□□ 0.5
VAPA-209ENST00000585042 BMP8BP34820 402 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 PLCD1P51178 756 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 GABPAQ06546 454 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 TRIM32Q13049 653 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 RAB3GAP1Q15042 981 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 SLC9C2Q5TAH2 1124 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 POTEEQ6S8J3 1075 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 PORCNQ9H237 461 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 NDUFB9Q9Y6M9 179 aa18.2■□□□□ 0.5
VAPA-209ENST00000585042 RANBP2P49792 3224 aaKnown RBP18.2■□□□□ 0.5
VAPA-209ENST00000585042 PRKAR2AP13861 404 aaKnown RBP18.19■□□□□ 0.5
VAPA-209ENST00000585042 SHMT1P34896 483 aa18.19■□□□□ 0.5
VAPA-209ENST00000585042 MNX1P50219 401 aaPredicted RBP18.19■□□□□ 0.5
VAPA-209ENST00000585042 CACNB2Q08289 660 aaPredicted RBP18.19■□□□□ 0.5
VAPA-209ENST00000585042 DIS3LQ8TF46 1054 aaKnown RBP18.19■□□□□ 0.5
VAPA-209ENST00000585042 APBA2Q99767 749 aa18.19■□□□□ 0.5
VAPA-209ENST00000585042 PAGR1Q9BTK6 254 aa18.19■□□□□ 0.5
VAPA-209ENST00000585042 C11orf49Q9H6J7 331 aa18.19■□□□□ 0.5
VAPA-209ENST00000585042 IL1RAPL2Q9NP60 686 aa18.19■□□□□ 0.5
VAPA-209ENST00000585042 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
VAPA-209ENST00000585042 SLC15A5A6NIM6 579 aa18.18■□□□□ 0.5
VAPA-209ENST00000585042 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
VAPA-209ENST00000585042 PDE6AP16499 860 aa18.18■□□□□ 0.5
VAPA-209ENST00000585042 VCAM1P19320 739 aa18.18■□□□□ 0.5
VAPA-209ENST00000585042 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
VAPA-209ENST00000585042 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
VAPA-209ENST00000585042 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
VAPA-209ENST00000585042 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
VAPA-209ENST00000585042 PEX10O60683 326 aa18.17■□□□□ 0.5
VAPA-209ENST00000585042 CNMDO75829 334 aa18.17■□□□□ 0.5
VAPA-209ENST00000585042 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
VAPA-209ENST00000585042 MCM9Q9NXL9 1143 aa18.17■□□□□ 0.5
VAPA-209ENST00000585042 SWAP70Q9UH65 585 aa18.17■□□□□ 0.5
VAPA-209ENST00000585042 TCRBV5S4A2TA0A5A2 114 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 HOXC6P09630 235 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 PTPREP23469 700 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 GUCY1A2P33402 732 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 ZYXQ15942 572 aaKnown RBP18.16■□□□□ 0.5
VAPA-209ENST00000585042 LHX8Q68G74 356 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 ACER1Q8TDN7 264 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 GDF15Q99988 308 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 STAP2Q9UGK3 403 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
VAPA-209ENST00000585042 GOLIM4O00461 696 aa18.15■□□□□ 0.5
VAPA-209ENST00000585042 STRNO43815 780 aa18.15■□□□□ 0.5
VAPA-209ENST00000585042 COL6A1P12109 1028 aa18.15■□□□□ 0.5
VAPA-209ENST00000585042 COG2Q14746 738 aa18.15■□□□□ 0.5
VAPA-209ENST00000585042 MFSD14CQ5VZR4 134 aa18.15■□□□□ 0.5
VAPA-209ENST00000585042 RPAP3Q9H6T3 665 aaPredicted RBP18.15■□□□□ 0.5
VAPA-209ENST00000585042 DCP1AQ9NPI6 582 aaPredicted RBP18.15■□□□□ 0.5
VAPA-209ENST00000585042 ATP8A2Q9NTI2 1148 aa18.15■□□□□ 0.5
VAPA-209ENST00000585042 IVNS1ABPQ9Y6Y0 642 aa18.15■□□□□ 0.5
VAPA-209ENST00000585042 ALPK3Q96L96 1907 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 MSCO60682 206 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 ATP5JP18859 108 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 SEPT2Q15019 361 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 CCL14Q16627 93 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 GPR153Q6NV75 609 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 TMEM179Q6ZVK1 233 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 SIRT2Q8IXJ6 389 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.14■□□□□ 0.49
VAPA-209ENST00000585042 BTBD7Q9P203 1132 aa18.14■□□□□ 0.49
VAPA-209ENST00000585042 DDX60LQ5H9U9 1706 aaKnown RBP18.13■□□□□ 0.49
VAPA-209ENST00000585042 SPDYE16A6NNV3 312 aaPredicted RBP18.13■□□□□ 0.49
VAPA-209ENST00000585042 GRB14Q14449 540 aa18.13■□□□□ 0.49
VAPA-209ENST00000585042 C7orf61Q8IZ16 206 aa18.13■□□□□ 0.49
VAPA-209ENST00000585042 MB21D1Q8N884 522 aa18.13■□□□□ 0.49
VAPA-209ENST00000585042 LPAR1Q92633 364 aa18.13■□□□□ 0.49
VAPA-209ENST00000585042 CCDC17Q96LX7 622 aa18.13■□□□□ 0.49
VAPA-209ENST00000585042 DNAJC2Q99543 621 aaKnown RBP18.13■□□□□ 0.49
VAPA-209ENST00000585042 PAG1Q9NWQ8 432 aa18.13■□□□□ 0.49
VAPA-209ENST00000585042 SZT2Q5T011 3432 aa18.13■□□□□ 0.49
VAPA-209ENST00000585042 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
VAPA-209ENST00000585042 CCND3P30281 292 aaPredicted RBP18.12■□□□□ 0.49
VAPA-209ENST00000585042 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
VAPA-209ENST00000585042 SHCBP1Q8NEM2 672 aa18.12■□□□□ 0.49
VAPA-209ENST00000585042 COG6Q9Y2V7 657 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms