RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
TRAF4-215ENST00000584944 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
TRAF4-215ENST00000584944 PTPN18Q99952 460 aa16.4■□□□□ 0.22
TRAF4-215ENST00000584944 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
TRAF4-215ENST00000584944 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
TRAF4-215ENST00000584944 ANAPC4Q9UJX5 808 aa16.4■□□□□ 0.22
TRAF4-215ENST00000584944 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
TRAF4-215ENST00000584944 OTOFQ9HC10 1997 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 FOXP2O15409 715 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 RAD21O60216 631 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 CETPP11597 493 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 EVX2Q03828 476 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 OTOP1Q7RTM1 612 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 ESR2Q92731 530 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 KRT23Q9C075 422 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 IL25Q9H293 177 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 HTTP42858 3142 aa16.39■□□□□ 0.21
TRAF4-215ENST00000584944 TFAP4Q01664 338 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 ICA1Q05084 483 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 CRHR2Q13324 411 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 ZNF280CQ8ND82 737 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 MAP4K1Q92918 833 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 MS4A4AQ96JQ5 239 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 KANSL2Q9H9L4 492 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 TRIM17Q9Y577 477 aa16.38■□□□□ 0.21
TRAF4-215ENST00000584944 DDX60LQ5H9U9 1706 aaKnown RBP16.38■□□□□ 0.21
TRAF4-215ENST00000584944 CCL15-CCL14A0A0B4J2E2 113 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 AKR1B1P15121 316 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 RASA1P20936 1047 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 NT5C2P49902 561 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 SPP2Q13103 211 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 SEPT2Q15019 361 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 CCL15Q16663 113 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 STAG1Q8WVM7 1258 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
TRAF4-215ENST00000584944 LSG1Q9H089 658 aaKnown RBP16.37■□□□□ 0.21
TRAF4-215ENST00000584944 USP17L10C9JJH3 530 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 CXCL11O14625 94 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 IRF6O14896 467 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 ORC4O43929 436 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 FAM47AQ5JRC9 791 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 FASTKD5Q7L8L6 764 aaKnown RBP16.36■□□□□ 0.21
TRAF4-215ENST00000584944 IQCA1Q86XH1 822 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 ERO1AQ96HE7 468 aa16.36■□□□□ 0.21
TRAF4-215ENST00000584944 UPF2Q9HAU5 1272 aaKnown RBP16.36■□□□□ 0.21
TRAF4-215ENST00000584944 ERICH2A1L162 156 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 SMIM22K7EJ46 135 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 USP14P54578 494 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 MTMR2Q13614 643 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 RRP1BQ14684 758 aaKnown RBP16.35■□□□□ 0.21
TRAF4-215ENST00000584944 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
TRAF4-215ENST00000584944 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
TRAF4-215ENST00000584944 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 PRPF38BQ5VTL8 546 aaKnown RBP16.35■□□□□ 0.21
TRAF4-215ENST00000584944 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
TRAF4-215ENST00000584944 TBC1D10CQ8IV04 446 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 CD99L2Q8TCZ2 262 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 UBAC1Q9BSL1 405 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.35■□□□□ 0.21
TRAF4-215ENST00000584944 ISY1Q9ULR0 285 aaKnown RBP16.35■□□□□ 0.21
TRAF4-215ENST00000584944 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 CENPFP49454 3210 aa16.35■□□□□ 0.21
TRAF4-215ENST00000584944 DOCK1Q14185 1865 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 C19orf81C9J6K1 198 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 KDM4AO75164 1064 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 CAP1Q01518 475 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 SP3Q02447 781 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 PABPC4Q13310 644 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRAF4-215ENST00000584944 KRT32Q14532 448 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 NCOA7Q8NI08 942 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 BRI3BPQ8WY22 251 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 WDR18Q9BV38 432 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 GOPCQ9HD26 462 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 PTPN22Q9Y2R2 807 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 AFG3L2Q9Y4W6 797 aa16.34■□□□□ 0.21
TRAF4-215ENST00000584944 KIAA0100Q14667 2235 aaKnown RBP16.34■□□□□ 0.21
TRAF4-215ENST00000584944 SLC27A2O14975 620 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 TTLL1O95922 423 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 CYP21A2P08686 494 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 HMGCS2P54868 508 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 BACE1P56817 501 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 USP17L2Q6R6M4 530 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 NEDD1Q8NHV4 660 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
TRAF4-215ENST00000584944 SIPA1L1O43166 1804 aa16.33■□□□□ 0.2
TRAF4-215ENST00000584944 B4E1Z4 1266 aa16.32■□□□□ 0.2
TRAF4-215ENST00000584944 E7EWF7 191 aa16.32■□□□□ 0.2
TRAF4-215ENST00000584944 MYH8P13535 1937 aa16.32■□□□□ 0.2
TRAF4-215ENST00000584944 EEF2P13639 858 aaKnown RBP16.32■□□□□ 0.2
TRAF4-215ENST00000584944 NEDD4P46934 1319 aa16.32■□□□□ 0.2
TRAF4-215ENST00000584944 FGD1P98174 961 aa16.32■□□□□ 0.2
TRAF4-215ENST00000584944 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms