RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 GUCY1A2P33402 732 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 NUCB1Q02818 461 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 MLLT1Q03111 559 aaPredicted RBP20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 SHROOM1Q2M3G4 852 aaPredicted RBP20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 SLC9C1Q4G0N8 1177 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 LBX2Q6XYB7 198 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 ZNF333Q96JL9 665 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 FEZ1Q99689 392 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 SH2D4AQ9H788 454 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 ZNF287Q9HBT7 754 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 ZSWIM8A7E2V4 1837 aa20.08■□□□□ 0.8
CSNK1D-225ENST00000584913 CYP2D6P10635 497 aa20.07■□□□□ 0.8
CSNK1D-225ENST00000584913 CTGFP29279 349 aa20.07■□□□□ 0.8
CSNK1D-225ENST00000584913 CDK8P49336 464 aa20.07■□□□□ 0.8
CSNK1D-225ENST00000584913 IRF5Q13568 498 aa20.07■□□□□ 0.8
CSNK1D-225ENST00000584913 CHD1LQ86WJ1 897 aa20.07■□□□□ 0.8
CSNK1D-225ENST00000584913 NACAP1Q9BZK3 213 aa20.07■□□□□ 0.8
CSNK1D-225ENST00000584913 MYPNQ86TC9 1320 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 GREB1LQ9C091 1923 aaPredicted RBP20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L15C9J2P7 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 PATL2C9JE40 543 aaKnown RBP20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L13C9JLJ4 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L11C9JVI0 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L18D6R9N7 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L22D6RA61 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L17D6RBQ6 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L19D6RCP7 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L20D6RJB6 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 HERVK_113P62684 666 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 USP17L24Q0WX57 530 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 LPAR1Q92633 364 aa20.06■□□□□ 0.8
CSNK1D-225ENST00000584913 TNPO2O14787 897 aaKnown RBP20.05■□□□□ 0.8
CSNK1D-225ENST00000584913 CAPN2P17655 700 aa20.05■□□□□ 0.8
CSNK1D-225ENST00000584913 SEPT2Q15019 361 aa20.05■□□□□ 0.8
CSNK1D-225ENST00000584913 ANKRD13CQ8N6S4 541 aa20.05■□□□□ 0.8
CSNK1D-225ENST00000584913 SLAIN1Q8ND83 568 aa20.05■□□□□ 0.8
CSNK1D-225ENST00000584913 ARHGEF10LQ9HCE6 1279 aa20.05■□□□□ 0.8
CSNK1D-225ENST00000584913 EPB41L4AQ9HCS5 686 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-225ENST00000584913 M0R2C6 588 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 NEFLP07196 543 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 VCAM1P19320 739 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 EVX2Q03828 476 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 SLC44A5Q8NCS7 719 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 RAET1EQ8TD07 263 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 PXYLP1Q8TE99 480 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 COA7Q96BR5 231 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 DYNLL2Q96FJ2 89 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 LNPKQ9C0E8 428 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 KANSL2Q9H9L4 492 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 HELLSQ9NRZ9 838 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 SYNPO2Q9UMS6 1093 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 TMX2Q9Y320 296 aa20.04■□□□□ 0.8
CSNK1D-225ENST00000584913 MPHOSPH10O00566 681 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 IGHDP01880 384 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 TDO2P48775 406 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 SOX10P56693 466 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 ICA1Q05084 483 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 CATSPERGQ6ZRH7 1159 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 IFNL3Q8IZI9 196 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 ACER1Q8TDN7 264 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 P2RX7Q99572 595 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 RABGAP1Q9Y3P9 1069 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 PLIN4Q96Q06 1357 aa20.03■□□□□ 0.8
CSNK1D-225ENST00000584913 ZMYM6O95789 1325 aa20.02■□□□□ 0.8
CSNK1D-225ENST00000584913 AKR1B1P15121 316 aa20.02■□□□□ 0.8
CSNK1D-225ENST00000584913 GRK4P32298 578 aa20.02■□□□□ 0.8
CSNK1D-225ENST00000584913 PRKCZQ05513 592 aa20.02■□□□□ 0.8
CSNK1D-225ENST00000584913 GPRC5AQ8NFJ5 357 aa20.02■□□□□ 0.8
CSNK1D-225ENST00000584913 CYP2D7A0A087X1C5 515 aa20.01■□□□□ 0.79
CSNK1D-225ENST00000584913 MAPK4P31152 587 aa20.01■□□□□ 0.79
CSNK1D-225ENST00000584913 TMEM106CQ9BVX2 250 aa20.01■□□□□ 0.79
CSNK1D-225ENST00000584913 A0A0G2JMZ2 1700 aa20.01■□□□□ 0.79
CSNK1D-225ENST00000584913 A0A1W2PRG0 241 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 WDR46O15213 610 aaKnown RBP20■□□□□ 0.79
CSNK1D-225ENST00000584913 SLC3A2P08195 630 aaKnown RBP20■□□□□ 0.79
CSNK1D-225ENST00000584913 RASA1P20936 1047 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 ERVK-9P63128 1117 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 ERVK-24P63145 666 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 PLEKHM2Q8IWE5 1019 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 SOCS4Q8WXH5 440 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 NAPBQ9H115 298 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 VCPKMTQ9H867 229 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 RBPJLQ9UBG7 517 aa20■□□□□ 0.79
CSNK1D-225ENST00000584913 APPP05067 770 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 FLT3LGP49771 235 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 UBXN2AP68543 259 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 CCNA1P78396 465 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 PDE4BQ07343 736 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 ALX1Q15699 326 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 ZYXQ15942 572 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 SIAH1Q8IUQ4 282 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 MB21D1Q8N884 522 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 SEC62Q99442 399 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 RPAP3Q9H6T3 665 aaPredicted RBP19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 MKNK2Q9HBH9 465 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 HOXC10Q9NYD6 342 aa19.99■□□□□ 0.79
CSNK1D-225ENST00000584913 NYAP2Q9P242 653 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms