RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCDC57-219ENST00000584717 MAP3K12Q12852 859 aa20.19■□□□□ 0.82
CCDC57-219ENST00000584717 AACSQ86V21 672 aa20.19■□□□□ 0.82
CCDC57-219ENST00000584717 CERS3Q8IU89 383 aa20.19■□□□□ 0.82
CCDC57-219ENST00000584717 C12orf42Q96LP6 360 aa20.19■□□□□ 0.82
CCDC57-219ENST00000584717 APBA2Q99767 749 aa20.19■□□□□ 0.82
CCDC57-219ENST00000584717 EHD4Q9H223 541 aa20.19■□□□□ 0.82
CCDC57-219ENST00000584717 PFASO15067 1338 aa20.19■□□□□ 0.82
CCDC57-219ENST00000584717 NAV1Q8NEY1 1877 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L15C9J2P7 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L13C9JLJ4 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L11C9JVI0 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L18D6R9N7 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L22D6RA61 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L17D6RBQ6 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L19D6RCP7 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L20D6RJB6 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 CNMDO75829 334 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 USP17L24Q0WX57 530 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 ABCB5Q2M3G0 1257 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 CERKLQ49MI3 558 aaPredicted RBP20.18■□□□□ 0.82
CCDC57-219ENST00000584717 WDR78Q5VTH9 848 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 ACER1Q8TDN7 264 aa20.18■□□□□ 0.82
CCDC57-219ENST00000584717 VCAM1P19320 739 aa20.17■□□□□ 0.82
CCDC57-219ENST00000584717 BMP8BP34820 402 aa20.17■□□□□ 0.82
CCDC57-219ENST00000584717 TTC6Q86TZ1 520 aa20.17■□□□□ 0.82
CCDC57-219ENST00000584717 RABGAP1Q9Y3P9 1069 aa20.17■□□□□ 0.82
CCDC57-219ENST00000584717 DNAH12Q6ZR08 3092 aa20.17■□□□□ 0.82
CCDC57-219ENST00000584717 FRMPD3Q5JV73 1810 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 SHMT1P34896 483 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 MAGEA10P43363 369 aaPredicted RBP20.16■□□□□ 0.82
CCDC57-219ENST00000584717 PLCD1P51178 756 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 USP14P54578 494 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 MAP2K5Q13163 448 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 LHX8Q68G74 356 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 CATSPERGQ6ZRH7 1159 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 RIOK1Q9BRS2 568 aaKnown RBP20.16■□□□□ 0.82
CCDC57-219ENST00000584717 KIAA1683Q9H0B3 1180 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
CCDC57-219ENST00000584717 CCNA1P78396 465 aa20.15■□□□□ 0.82
CCDC57-219ENST00000584717 ERC1Q8IUD2 1116 aa20.15■□□□□ 0.82
CCDC57-219ENST00000584717 CABP5Q9NP86 173 aa20.15■□□□□ 0.82
CCDC57-219ENST00000584717 MAGEB6P1A0A0J9YX57 407 aa20.14■□□□□ 0.81
CCDC57-219ENST00000584717 GLRX3O76003 335 aaKnown RBP20.14■□□□□ 0.81
CCDC57-219ENST00000584717 POLR3DP05423 398 aaPredicted RBP20.14■□□□□ 0.81
CCDC57-219ENST00000584717 COL6A1P12109 1028 aa20.14■□□□□ 0.81
CCDC57-219ENST00000584717 GUCY1A2P33402 732 aa20.14■□□□□ 0.81
CCDC57-219ENST00000584717 EVX2Q03828 476 aa20.14■□□□□ 0.81
CCDC57-219ENST00000584717 PANK1Q8TE04 598 aa20.14■□□□□ 0.81
CCDC57-219ENST00000584717 EDC3Q96F86 508 aaKnown RBP20.14■□□□□ 0.81
CCDC57-219ENST00000584717 RPAP3Q9H6T3 665 aaPredicted RBP20.14■□□□□ 0.81
CCDC57-219ENST00000584717 FLRT1Q9NZU1 646 aa20.14■□□□□ 0.81
CCDC57-219ENST00000584717 BTBD7Q9P203 1132 aa20.14■□□□□ 0.81
CCDC57-219ENST00000584717 PTPREP23469 700 aa20.13■□□□□ 0.81
CCDC57-219ENST00000584717 SEPT2Q15019 361 aa20.13■□□□□ 0.81
CCDC57-219ENST00000584717 LRRC26Q2I0M4 334 aa20.13■□□□□ 0.81
CCDC57-219ENST00000584717 TMED8Q6PL24 325 aaPredicted RBP20.13■□□□□ 0.81
CCDC57-219ENST00000584717 A0A0C4DFX4 3053 aa20.12■□□□□ 0.81
CCDC57-219ENST00000584717 SLC15A5A6NIM6 579 aa20.12■□□□□ 0.81
CCDC57-219ENST00000584717 SPDYE16A6NNV3 312 aaPredicted RBP20.12■□□□□ 0.81
CCDC57-219ENST00000584717 APBB1O00213 710 aa20.12■□□□□ 0.81
CCDC57-219ENST00000584717 MPHOSPH10O00566 681 aaKnown RBP20.12■□□□□ 0.81
CCDC57-219ENST00000584717 PDE6AP16499 860 aa20.12■□□□□ 0.81
CCDC57-219ENST00000584717 SLC9C2Q5TAH2 1124 aa20.12■□□□□ 0.81
CCDC57-219ENST00000584717 MFSD14CQ5VZR4 134 aa20.12■□□□□ 0.81
CCDC57-219ENST00000584717 CRNKL1Q9BZJ0 848 aaKnown RBP20.12■□□□□ 0.81
CCDC57-219ENST00000584717 UBE2OQ9C0C9 1292 aaKnown RBP20.12■□□□□ 0.81
CCDC57-219ENST00000584717 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
CCDC57-219ENST00000584717 GABPAQ06546 454 aa20.11■□□□□ 0.81
CCDC57-219ENST00000584717 TTF1Q15361 905 aaPredicted RBP20.11■□□□□ 0.81
CCDC57-219ENST00000584717 LBX2Q6XYB7 198 aa20.11■□□□□ 0.81
CCDC57-219ENST00000584717 TDHQ8IZJ6 230 aa20.11■□□□□ 0.81
CCDC57-219ENST00000584717 SLC17A8Q8NDX2 589 aa20.11■□□□□ 0.81
CCDC57-219ENST00000584717 RHPN1Q8TCX5 695 aa20.11■□□□□ 0.81
CCDC57-219ENST00000584717 MCM9Q9NXL9 1143 aa20.11■□□□□ 0.81
CCDC57-219ENST00000584717 IVNS1ABPQ9Y6Y0 642 aa20.11■□□□□ 0.81
CCDC57-219ENST00000584717 ZNF532Q9HCE3 1301 aa20.1■□□□□ 0.81
CCDC57-219ENST00000584717 GOLIM4O00461 696 aa20.1■□□□□ 0.81
CCDC57-219ENST00000584717 CNGA1P29973 690 aa20.1■□□□□ 0.81
CCDC57-219ENST00000584717 GRB14Q14449 540 aa20.1■□□□□ 0.81
CCDC57-219ENST00000584717 NPLOC4Q8TAT6 608 aa20.1■□□□□ 0.81
CCDC57-219ENST00000584717 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
CCDC57-219ENST00000584717 DNAJC2Q99543 621 aaKnown RBP20.1■□□□□ 0.81
CCDC57-219ENST00000584717 A0A1W2PRG0 241 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 CYP2D6P10635 497 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 CYP2C19P33261 490 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 ATP2B2Q01814 1243 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 LRIT3Q3SXY7 679 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 HSP90AB4PQ58FF6 505 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 Q7L0L9 218 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 LCORLQ8N3X6 602 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 DEFB123Q8N688 67 aa20.09■□□□□ 0.81
CCDC57-219ENST00000584717 LAMA2P24043 3122 aaKnown RBP20.08■□□□□ 0.81
CCDC57-219ENST00000584717 HOXC6P09630 235 aa20.08■□□□□ 0.81
CCDC57-219ENST00000584717 MDM2Q00987 491 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-219ENST00000584717 SLC44A5Q8NCS7 719 aa20.08■□□□□ 0.81
CCDC57-219ENST00000584717 TANGO6Q9C0B7 1094 aa20.08■□□□□ 0.81
CCDC57-219ENST00000584717 SENP6Q9GZR1 1112 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-219ENST00000584717 DDX20Q9UHI6 824 aaKnown RBP20.08■□□□□ 0.81
CCDC57-219ENST00000584717 TCRBV5S4A2TA0A5A2 114 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms