RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
CASC3-209ENST00000583902 SEC23AQ15436 765 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 ANGEL2Q5VTE6 544 aaKnown RBP10.78□□□□□ -0.68
CASC3-209ENST00000583902 NFXL1Q6ZNB6 911 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 SH3BP5LQ7L8J4 393 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 FAM177A1Q8N128 213 aaPredicted RBP10.78□□□□□ -0.68
CASC3-209ENST00000583902 MKL1Q969V6 931 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 TEPSINQ96N21 525 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 ZNF341Q9BYN7 854 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 TAF1DQ9H5J8 278 aaPredicted RBP10.78□□□□□ -0.68
CASC3-209ENST00000583902 LY9Q9HBG7 655 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 NYAP2Q9P242 653 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
CASC3-209ENST00000583902 SIPA1L1O43166 1804 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 TNKSO95271 1327 aa10.78□□□□□ -0.68
CASC3-209ENST00000583902 ZBTB43O43298 467 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 PPP1R12BO60237 982 aaPredicted RBP10.77□□□□□ -0.69
CASC3-209ENST00000583902 TOP1P11387 765 aaKnown RBP10.77□□□□□ -0.69
CASC3-209ENST00000583902 KIF5BP33176 963 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 VASPP50552 380 aaPredicted RBP10.77□□□□□ -0.69
CASC3-209ENST00000583902 CACNB3P54284 484 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 ABCB5Q2M3G0 1257 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 CYB5R4Q7L1T6 521 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 CDC37L1Q7L3B6 337 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 ZFPM1Q8IX07 1006 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 ENAHQ8N8S7 591 aaPredicted RBP10.77□□□□□ -0.69
CASC3-209ENST00000583902 TRPM4Q8TD43 1214 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 GTF3C6Q969F1 213 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 DYNLL2Q96FJ2 89 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 KAT14Q9H8E8 782 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 MTMR4Q9NYA4 1195 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 GGA3Q9NZ52 723 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 TPCN1Q9ULQ1 816 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 PCDHAC2Q9Y5I4 1007 aa10.77□□□□□ -0.69
CASC3-209ENST00000583902 IGKV6D-41A0A0C4DH26 115 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 CPLX1O14810 134 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 PRDM1O75626 825 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 PDIA3P30101 505 aaKnown RBP10.76□□□□□ -0.69
CASC3-209ENST00000583902 CAP2P40123 477 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 HIRAP54198 1017 aaPredicted RBP10.76□□□□□ -0.69
CASC3-209ENST00000583902 APOA5Q6Q788 366 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 USP48Q86UV5 1035 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 LDHDQ86WU2 507 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 TMEM39BQ9GZU3 492 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 ZNF112Q9UJU3 913 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
CASC3-209ENST00000583902 KLF18A0A0U1RQI7 1052 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 SHTN1A0MZ66 631 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 EGFRP00533 1210 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 CPA1P15085 419 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 IREB2P48200 963 aaKnown RBP10.75□□□□□ -0.69
CASC3-209ENST00000583902 METAP2P50579 478 aaKnown RBP eCLIP10.75□□□□□ -0.69
CASC3-209ENST00000583902 FKBP1BP68106 108 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 ME3Q16798 604 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 KRT26Q7Z3Y9 468 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 ZNF654Q8IZM8 581 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 FANCBQ8NB91 859 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 CTCFLQ8NI51 663 aaPredicted RBP10.75□□□□□ -0.69
CASC3-209ENST00000583902 WASF1Q92558 559 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 AS3MTQ9HBK9 375 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 ARHGEF10LQ9HCE6 1279 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 IL17RBQ9NRM6 502 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 TACC3Q9Y6A5 838 aa10.75□□□□□ -0.69
CASC3-209ENST00000583902 GOLGA8BA8MQT2 603 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 CD2BP2O95400 341 aaKnown RBP10.74□□□□□ -0.69
CASC3-209ENST00000583902 NUCB2P80303 420 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 APOBRQ0VD83 1088 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 TROAPQ12815 778 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 MAP3K11Q16584 847 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 FAM47AQ5JRC9 791 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 NOL9Q5SY16 702 aaKnown RBP10.74□□□□□ -0.69
CASC3-209ENST00000583902 GPATCH4Q5T3I0 446 aaKnown RBP10.74□□□□□ -0.69
CASC3-209ENST00000583902 TEX2Q8IWB9 1127 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 TRIM22Q8IYM9 498 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 PNMA1Q8ND90 353 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 GMCL1P1Q8NEA9 526 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 CEP95Q96GE4 821 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 DNAJC18Q9H819 358 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 INCENPQ9NQS7 918 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 STX8Q9UNK0 236 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 SMC3Q9UQE7 1217 aa10.74□□□□□ -0.69
CASC3-209ENST00000583902 ATAD5Q96QE3 1844 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 DOCK1Q14185 1865 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 PHF20L1A8MW92 1017 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 MPHOSPH10O00566 681 aaKnown RBP10.73□□□□□ -0.69
CASC3-209ENST00000583902 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
CASC3-209ENST00000583902 AKR1B1P15121 316 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 IFNAR1P17181 557 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 USP14P54578 494 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 ICA1Q05084 483 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 TRAF1Q13077 416 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 RTN1Q16799 776 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 CHST3Q7LGC8 479 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 ARMC9Q7Z3E5 817 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 SLC44A5Q8NCS7 719 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 LPAR1Q92633 364 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 TCEANC2Q96MN5 208 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms