RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
GGA3-217ENST00000583667 ABCF2Q9UG63 623 aa14.13□□□□□ -0.15
GGA3-217ENST00000583667 IQSEC3Q9UPP2 1182 aaPredicted RBP14.13□□□□□ -0.15
GGA3-217ENST00000583667 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
GGA3-217ENST00000583667 SUGT1Q9Y2Z0 365 aa14.13□□□□□ -0.15
GGA3-217ENST00000583667 SPDYE2BA6NHP3 402 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 TNFRSF10AO00220 468 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 SPDYE6P0CI01 402 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 PPP4CP60510 307 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 EXOSC10Q01780 885 aaKnown RBP14.12□□□□□ -0.15
GGA3-217ENST00000583667 CFAP100Q494V2 611 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 NAA16Q6N069 864 aaPredicted RBP14.12□□□□□ -0.15
GGA3-217ENST00000583667 CERS3Q8IU89 383 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
GGA3-217ENST00000583667 AGXT2Q9BYV1 514 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 GABRQQ9UN88 632 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 WDR19Q8NEZ3 1342 aa14.12□□□□□ -0.15
GGA3-217ENST00000583667 GSG1L2A8MUP6 293 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 E7EWF7 191 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 ZNF213O14771 459 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 MBD4O95243 580 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 LDHCP07864 332 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 AK2P54819 239 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 GSTO1P78417 241 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 MECOMQ03112 1051 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 DHX32Q7L7V1 743 aaKnown RBP14.11□□□□□ -0.15
GGA3-217ENST00000583667 CDAN1Q8IWY9 1227 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 IFNL3Q8IZI9 196 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 CERS5Q8N5B7 392 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.11□□□□□ -0.15
GGA3-217ENST00000583667 CDX2Q99626 313 aaPredicted RBP14.11□□□□□ -0.15
GGA3-217ENST00000583667 NACAP1Q9BZK3 213 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 PAK6Q9NQU5 681 aaPredicted RBP14.11□□□□□ -0.15
GGA3-217ENST00000583667 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
GGA3-217ENST00000583667 MYO5AQ9Y4I1 1855 aaKnown RBP14.11□□□□□ -0.15
GGA3-217ENST00000583667 TAF6LQ9Y6J9 622 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 OTOFQ9HC10 1997 aa14.11□□□□□ -0.15
GGA3-217ENST00000583667 MAGEB6P1A0A0J9YX57 407 aa14.1□□□□□ -0.15
GGA3-217ENST00000583667 SPDYE5A6NIY4 337 aa14.1□□□□□ -0.15
GGA3-217ENST00000583667 ADCY3O60266 1144 aa14.1□□□□□ -0.15
GGA3-217ENST00000583667 STOX1Q6ZVD7 989 aa14.1□□□□□ -0.15
GGA3-217ENST00000583667 TEPSINQ96N21 525 aa14.1□□□□□ -0.15
GGA3-217ENST00000583667 ANAPC4Q9UJX5 808 aa14.1□□□□□ -0.15
GGA3-217ENST00000583667 CSADQ9Y600 493 aa14.1□□□□□ -0.15
GGA3-217ENST00000583667 IRF6O14896 467 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 INHAP05111 366 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 LDHBP07195 334 aaKnown RBP14.09□□□□□ -0.15
GGA3-217ENST00000583667 ELNP15502 786 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 NT5C2P49902 561 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 EVCP57679 992 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 FKBP1AP62942 108 aaKnown RBP14.09□□□□□ -0.15
GGA3-217ENST00000583667 SNAPC2Q13487 334 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 ADGRA1Q86SQ6 560 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 LCORLQ8N3X6 602 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 ARMT1Q9H993 441 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 ADGRA2Q96PE1 1338 aa14.09□□□□□ -0.15
GGA3-217ENST00000583667 F8W031 263 aaPredicted RBP14.08□□□□□ -0.16
GGA3-217ENST00000583667 HSP90AA1P07900 732 aaKnown RBP14.08□□□□□ -0.16
GGA3-217ENST00000583667 PRDX5P30044 214 aa14.08□□□□□ -0.16
GGA3-217ENST00000583667 CHAF1AQ13111 956 aaPredicted RBP14.08□□□□□ -0.16
GGA3-217ENST00000583667 SLF2Q8IX21 1173 aa14.08□□□□□ -0.16
GGA3-217ENST00000583667 MTA3Q9BTC8 594 aa14.08□□□□□ -0.16
GGA3-217ENST00000583667 MRIQ9BWK5 157 aa14.08□□□□□ -0.16
GGA3-217ENST00000583667 EPB41L4AQ9HCS5 686 aaPredicted RBP14.08□□□□□ -0.16
GGA3-217ENST00000583667 MAST2Q6P0Q8 1798 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 TMEM265A0A087WTH1 108 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
GGA3-217ENST00000583667 PDIA4P13667 645 aaKnown RBP14.07□□□□□ -0.16
GGA3-217ENST00000583667 FCGRTP55899 365 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
GGA3-217ENST00000583667 ZNF697Q5TEC3 545 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 ERO1BQ86YB8 467 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 ANKLE1Q8NAG6 615 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 NCOA7Q8NI08 942 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 PXYLP1Q8TE99 480 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 CHMP4CQ96CF2 233 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 NAPBQ9H115 298 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 ATP8A2Q9NTI2 1148 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 SNCAIPQ9Y6H5 919 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 SLC4A4Q9Y6R1 1079 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 MYH13Q9UKX3 1938 aa14.07□□□□□ -0.16
GGA3-217ENST00000583667 GPR75-ASB3A0A0A6YYF3 556 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 PDHXO00330 501 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 BAG3O95817 575 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 APPP05067 770 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 FGRP09769 529 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 CPA1P15085 419 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 FLT3LGP49771 235 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 NUCB2P80303 420 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 SBK1Q52WX2 424 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 DZIP1Q86YF9 867 aaKnown RBP14.06□□□□□ -0.16
GGA3-217ENST00000583667 MB21D2Q8IYB1 491 aaPredicted RBP14.06□□□□□ -0.16
GGA3-217ENST00000583667 CRNKL1Q9BZJ0 848 aaKnown RBP14.06□□□□□ -0.16
GGA3-217ENST00000583667 NBPF3Q9H094 633 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 SLKQ9H2G2 1235 aaPredicted RBP14.06□□□□□ -0.16
GGA3-217ENST00000583667 SEMA6BQ9H3T3 888 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 CNNM2Q9H8M5 875 aa14.06□□□□□ -0.16
GGA3-217ENST00000583667 COL2A1P02458 1487 aaPredicted RBP14.06□□□□□ -0.16
GGA3-217ENST00000583667 PRKAB2O43741 272 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 MCM5P33992 734 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms