RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 NOVP48745 357 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 CCT2P78371 535 aaKnown RBP17.11■□□□□ 0.33
SENP3-208ENST00000583277 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
SENP3-208ENST00000583277 STX8Q9UNK0 236 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 IGKV6D-41A0A0C4DH26 115 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
SENP3-208ENST00000583277 RTN1Q16799 776 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 TMEM179Q6ZVK1 233 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 USP50Q70EL3 339 aaPredicted RBP17.11■□□□□ 0.33
SENP3-208ENST00000583277 CEP95Q96GE4 821 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 TEPSINQ96N21 525 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 NCOA5Q9HCD5 579 aaKnown RBP17.11■□□□□ 0.33
SENP3-208ENST00000583277 POLR2AP24928 1970 aaKnown RBP17.1■□□□□ 0.33
SENP3-208ENST00000583277 FAM196BA6NMK8 535 aa17.1■□□□□ 0.33
SENP3-208ENST00000583277 TOP1P11387 765 aaKnown RBP17.1■□□□□ 0.33
SENP3-208ENST00000583277 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
SENP3-208ENST00000583277 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
SENP3-208ENST00000583277 MAP3K10Q02779 954 aa17.1■□□□□ 0.33
SENP3-208ENST00000583277 ABCB5Q2M3G0 1257 aa17.1■□□□□ 0.33
SENP3-208ENST00000583277 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
SENP3-208ENST00000583277 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
SENP3-208ENST00000583277 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.1■□□□□ 0.33
SENP3-208ENST00000583277 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
SENP3-208ENST00000583277 MTMR4Q9NYA4 1195 aa17.1■□□□□ 0.33
SENP3-208ENST00000583277 ATAD5Q96QE3 1844 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 TTLL1O95922 423 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 PDCP20941 246 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 GJB2P29033 226 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 EPHX2P34913 555 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 NUCB2P80303 420 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 TROAPQ12815 778 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 RAB11FIP4Q86YS3 637 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 PNMA1Q8ND90 353 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 MAP3K14Q99558 947 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 CABP5Q9NP86 173 aa17.09■□□□□ 0.33
SENP3-208ENST00000583277 PTPDC1A2A3K4 754 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 RXRAP19793 462 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 KIF5BP33176 963 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 DCAF15Q66K64 600 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 CDAN1Q8IWY9 1227 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 FANCBQ8NB91 859 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
SENP3-208ENST00000583277 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
SENP3-208ENST00000583277 DCPSQ96C86 337 aaKnown RBP17.08■□□□□ 0.32
SENP3-208ENST00000583277 TMEM47Q9BQJ4 181 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 MYH6P13533 1939 aa17.08■□□□□ 0.32
SENP3-208ENST00000583277 CTDNEP1O95476 244 aa17.07■□□□□ 0.32
SENP3-208ENST00000583277 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
SENP3-208ENST00000583277 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
SENP3-208ENST00000583277 JAK2O60674 1132 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 CDC27P30260 824 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 SULF1Q8IWU6 871 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 FAM184AQ8NB25 1140 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 GINM1Q9NU53 330 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 GDF11O95390 407 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 GH2P01242 217 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 IFNAR1P17181 557 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 ICA1Q05084 483 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 SUPT20HL1Q3ZLR7 823 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 MIGA2Q7L4E1 593 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 PNMA8AQ86V59 439 aaPredicted RBP17.06■□□□□ 0.32
SENP3-208ENST00000583277 TAF1DQ9H5J8 278 aaPredicted RBP17.06■□□□□ 0.32
SENP3-208ENST00000583277 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
SENP3-208ENST00000583277 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 SYNPO2Q9UMS6 1093 aa17.06■□□□□ 0.32
SENP3-208ENST00000583277 SCAF8Q9UPN6 1271 aaKnown RBP17.06■□□□□ 0.32
SENP3-208ENST00000583277 DOCK1Q14185 1865 aa17.05■□□□□ 0.32
SENP3-208ENST00000583277 STK36Q9NRP7 1315 aa17.05■□□□□ 0.32
SENP3-208ENST00000583277 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
SENP3-208ENST00000583277 GNAQP50148 359 aa17.05■□□□□ 0.32
SENP3-208ENST00000583277 GRM4Q14833 912 aa17.05■□□□□ 0.32
SENP3-208ENST00000583277 TRIM22Q8IYM9 498 aa17.05■□□□□ 0.32
SENP3-208ENST00000583277 ZBTB21Q9ULJ3 1066 aa17.05■□□□□ 0.32
SENP3-208ENST00000583277 ASNSP08243 561 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 CAP2P40123 477 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 SEPT2Q15019 361 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 NTRK3Q16288 839 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
SENP3-208ENST00000583277 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 ZNF341Q9BYN7 854 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
SENP3-208ENST00000583277 CLIP2Q9UDT6 1046 aa17.04■□□□□ 0.32
SENP3-208ENST00000583277 WDR33Q9C0J8 1336 aaKnown RBP17.04■□□□□ 0.32
SENP3-208ENST00000583277 SYT1P21579 422 aa17.03■□□□□ 0.32
SENP3-208ENST00000583277 GUCY1A2P33402 732 aa17.03■□□□□ 0.32
SENP3-208ENST00000583277 RRP1BQ14684 758 aaKnown RBP17.03■□□□□ 0.32
SENP3-208ENST00000583277 LARP1BQ659C4 914 aaKnown RBP17.03■□□□□ 0.32
SENP3-208ENST00000583277 TMTC3Q6ZXV5 915 aa17.03■□□□□ 0.32
SENP3-208ENST00000583277 CLEC10AQ8IUN9 316 aa17.03■□□□□ 0.32
SENP3-208ENST00000583277 MKL1Q969V6 931 aa17.03■□□□□ 0.32
SENP3-208ENST00000583277 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
SENP3-208ENST00000583277 PHF20L1A8MW92 1017 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 STX6O43752 255 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 FMNL1O95466 1100 aaPredicted RBP17.02■□□□□ 0.32
SENP3-208ENST00000583277 EEF2P13639 858 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms