RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 LRSAM1Q6UWE0 723 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 TMTC3Q6ZXV5 915 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 SRBD1Q8N5C6 995 aaKnown RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 OSBPL5Q9H0X9 879 aaPredicted RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 PIM2Q9P1W9 311 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 V9GY48 417 aaPredicted RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 PRPF3O43395 683 aaKnown RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 CACNB3P54284 484 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 GABPAQ06546 454 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 GNL2Q13823 731 aaKnown RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 PKN1Q16512 942 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 LARGE2Q8N3Y3 721 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 NEDD1Q8NHV4 660 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 KIF13BQ9NQT8 1826 aa12.96□□□□□ -0.33
GGA3-213ENST00000582486 MMP1P03956 469 aa12.96□□□□□ -0.33
GGA3-213ENST00000582486 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.331e-9■■■□□ 18.3
GGA3-213ENST00000582486 ZFPM1Q8IX07 1006 aa12.96□□□□□ -0.33
GGA3-213ENST00000582486 TMEM47Q9BQJ4 181 aa12.96□□□□□ -0.33
GGA3-213ENST00000582486 RTEL1Q9NZ71 1219 aa12.96□□□□□ -0.33
GGA3-213ENST00000582486 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
GGA3-213ENST00000582486 RAD17O75943 681 aa12.96□□□□□ -0.34
GGA3-213ENST00000582486 TCP10Q12799 353 aa12.96□□□□□ -0.34
GGA3-213ENST00000582486 BICD2Q8TD16 824 aa12.96□□□□□ -0.34
GGA3-213ENST00000582486 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.34
GGA3-213ENST00000582486 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.34
GGA3-213ENST00000582486 SERPINB13Q9UIV8 391 aa12.96□□□□□ -0.34
GGA3-213ENST00000582486 MTMR7Q9Y216 660 aa12.96□□□□□ -0.34
GGA3-213ENST00000582486 CNTNAP5Q8WYK1 1306 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 BTBD18B2RXH4 712 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 KIF5BP33176 963 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 SHISA4Q96DD7 197 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 CEP95Q96GE4 821 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 POLR3EQ9NVU0 708 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 ME1P48163 572 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 SAFBQ15424 915 aaKnown RBP eCLIP12.95□□□□□ -0.34
GGA3-213ENST00000582486 DIS3L2Q8IYB7 885 aaKnown RBP12.95□□□□□ -0.34
GGA3-213ENST00000582486 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 PANK2Q9BZ23 570 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 MYH6P13533 1939 aa12.95□□□□□ -0.34
GGA3-213ENST00000582486 COL4A5P29400 1685 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 PSMD14O00487 310 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 HLA-DOAP06340 250 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 SLURP2P0DP57 97 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 STK38Q15208 465 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 CFAP100Q494V2 611 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
GGA3-213ENST00000582486 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 ANO1Q5XXA6 986 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
GGA3-213ENST00000582486 MAP3K14Q99558 947 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 IDI2Q9BXS1 227 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 DACT1Q9NYF0 836 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 FAM198AQ9UFP1 575 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 MAD2L2Q9UI95 211 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 NR1I2O75469 434 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 NASPP49321 788 aaPredicted RBP12.94□□□□□ -0.34
GGA3-213ENST00000582486 GRM4Q14833 912 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
GGA3-213ENST00000582486 RBSNQ9H1K0 784 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
GGA3-213ENST00000582486 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
GGA3-213ENST00000582486 DDTLA6NHG4 134 aaPredicted RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 YEATS4O95619 227 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 VIL1P09327 827 aaKnown RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 AKR1B1P15121 316 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 XBP1P17861 261 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 SHMT1P34896 483 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 NR5A1Q13285 461 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 SF3A1Q15459 793 aaKnown RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 FOXP1Q9H334 677 aaPredicted RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 SPTLC2O15270 562 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 NOVP48745 357 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 CAMK4Q16566 473 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 CCAR1Q8IX12 1150 aaKnown RBP12.93□□□□□ -0.34
GGA3-213ENST00000582486 KCNG4Q8TDN1 519 aa12.93□□□□□ -0.34
GGA3-213ENST00000582486 GOLGA8HP0CJ92 632 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
GGA3-213ENST00000582486 SH3BP5LQ7L8J4 393 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 ZSCAN29Q8IWY8 852 aaPredicted RBP12.92□□□□□ -0.34
GGA3-213ENST00000582486 NIM1KQ8IY84 436 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 GMLQ99445 158 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
GGA3-213ENST00000582486 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms