RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 CHMLP26374 656 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 TAF1CQ15572 869 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-212ENST00000582122 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 KIAA1211Q6ZU35 1233 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 FEZ1Q99689 392 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 PTPN18Q99952 460 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 AGTPBP1Q9UPW5 1226 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 PDHXO00330 501 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 SLURP2P0DP57 97 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 OSBPP22059 807 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 RRP1BQ14684 758 aaKnown RBP12.37□□□□□ -0.43
TOP3A-212ENST00000582122 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 ZNF589Q86UQ0 364 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-212ENST00000582122 GTF3C2Q8WUA4 911 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-212ENST00000582122 LPAR1Q92633 364 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 ATAD5Q96QE3 1844 aa12.37□□□□□ -0.43
TOP3A-212ENST00000582122 GPR25O00155 361 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 ZNF213O14771 459 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-212ENST00000582122 ORC4O43929 436 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 TLR2O60603 784 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
TOP3A-212ENST00000582122 RASA1P20936 1047 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 HOXA7P31268 230 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-212ENST00000582122 GCLCP48506 637 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-212ENST00000582122 ICA1Q05084 483 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 CRHR2Q13324 411 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 MTMR2Q13614 643 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 IMMTQ16891 758 aaKnown RBP12.36□□□□□ -0.43
TOP3A-212ENST00000582122 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 FAM43AQ8N2R8 423 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 C12orf42Q96LP6 360 aa12.36□□□□□ -0.43
TOP3A-212ENST00000582122 MYH8P13535 1937 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 FOXP2O15409 715 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 SGSM2O43147 1006 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 FKTNO75072 461 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 FGRP09769 529 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 AKR1B1P15121 316 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 HMGCS2P54868 508 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 MOGSQ13724 837 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 KIF22Q14807 665 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 SEPT2Q15019 361 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 CCDC178Q5BJE1 867 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 GPAT2Q6NUI2 795 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-212ENST00000582122 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 CNNM2Q9H8M5 875 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
TOP3A-212ENST00000582122 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-212ENST00000582122 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 PLIN4Q96Q06 1357 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 CDC45O75419 566 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 GNRH1P01148 92 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-212ENST00000582122 AKNAD1Q5T1N1 836 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 NEDD1Q8NHV4 660 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 STAG1Q8WVM7 1258 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 NYAP2Q9P242 653 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
TOP3A-212ENST00000582122 TMX2Q9Y320 296 aa12.34□□□□□ -0.43
TOP3A-212ENST00000582122 USP17L15C9J2P7 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L13C9JLJ4 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L11C9JVI0 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L18D6R9N7 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L22D6RA61 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L17D6RBQ6 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L19D6RCP7 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L20D6RJB6 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 TTLL1O95922 423 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 JAG1P78504 1218 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 TFAP4Q01664 338 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 SP3Q02447 781 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 USP17L24Q0WX57 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 CCDC84Q86UT8 332 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-212ENST00000582122 ZNF296Q8WUU4 475 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-212ENST00000582122 ESR2Q92731 530 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 KRT23Q9C075 422 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 TOMM22Q9NS69 142 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 PTPRFP10586 1907 aa12.33□□□□□ -0.44
TOP3A-212ENST00000582122 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
TOP3A-212ENST00000582122 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
TOP3A-212ENST00000582122 HOXD10P28358 340 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 EVX2Q03828 476 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 TRDNQ13061 729 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 FBXO46Q6PJ61 603 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-212ENST00000582122 IQCA1Q86XH1 822 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 MKL1Q969V6 931 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 TTC14Q96N46 770 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms