RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 HOXD10P28358 340 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 HERVK_113P62684 666 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 IRF5Q13568 498 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 SEPT2Q15019 361 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 NBPF11Q86T75 865 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
SUPT4H1-204ENST00000580947 GSG1L2A8MUP6 293 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 TNPO2O14787 897 aaKnown RBP12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 VCAM1P19320 739 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 GRK4P32298 578 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 FLT3LGP49771 235 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 RAB3GAP1Q15042 981 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 MTFR1Q15390 333 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 CTR9Q6PD62 1173 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 APPBP2Q92624 585 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 SHISA4Q96DD7 197 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 ROBO3Q96MS0 1386 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 RBPJLQ9UBG7 517 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 SWAP70Q9UH65 585 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
SUPT4H1-204ENST00000580947 PLXNA1Q9UIW2 1896 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 M0R2C6 588 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 RNF113AO15541 343 aaKnown RBP12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 CNMDO75829 334 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 AKR1B1P15121 316 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 MX1P20591 662 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 KIAA1755Q5JYT7 1200 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 CLEC10AQ8IUN9 316 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 EPB41L4AQ9HCS5 686 aaPredicted RBP12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 STAP2Q9UGK3 403 aa12.74□□□□□ -0.37
SUPT4H1-204ENST00000580947 GLRX3O76003 335 aaKnown RBP12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 ELNP15502 786 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 CDK8P49336 464 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 AAMPQ13685 434 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 ZYXQ15942 572 aaKnown RBP12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 Q3C1V9 767 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 SBK1Q52WX2 424 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 LBX2Q6XYB7 198 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 CATSPERGQ6ZRH7 1159 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 SMC5Q8IY18 1101 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 FEZ1Q99689 392 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 CABP5Q9NP86 173 aa12.73□□□□□ -0.37
SUPT4H1-204ENST00000580947 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L15C9J2P7 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L13C9JLJ4 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L11C9JVI0 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L18D6R9N7 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L22D6RA61 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L17D6RBQ6 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L19D6RCP7 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L20D6RJB6 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 ERC2O15083 957 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 FOXP2O15409 715 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 GPAA1O43292 621 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 ADCY3O60266 1144 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 MYCP01106 439 aaPredicted RBP12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 CCL5P13501 91 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP14P54578 494 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 ERVK-24P63145 666 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP17L24Q0WX57 530 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 UBE2Q1Q7Z7E8 422 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 GPRC5AQ8NFJ5 357 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 USP6NLQ92738 828 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 SEC62Q99442 399 aaKnown RBP12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 PORCNQ9H237 461 aa12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 ARPP21Q9UBL0 812 aaPredicted RBP12.72□□□□□ -0.37
SUPT4H1-204ENST00000580947 TRIOBPQ9H2D6 2365 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 MPHOSPH10O00566 681 aaKnown RBP12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 INHAP05111 366 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 GJB1P08034 283 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 PDE1AP54750 535 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 EXOC6Q8TAG9 804 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 GTF3C2Q8WUA4 911 aaPredicted RBP12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 COA7Q96BR5 231 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 CCDC17Q96LX7 622 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 UNC93B1Q9H1C4 597 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 RPAP3Q9H6T3 665 aaPredicted RBP12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 TMX2Q9Y320 296 aa12.71□□□□□ -0.37
SUPT4H1-204ENST00000580947 IGHDP01880 384 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms