RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 MAP4K4O95819 1239 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-210ENST00000580713 CYP2C19P33261 490 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 TIMM10P62072 90 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 CCNA1P78396 465 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 CRACR2BQ8N4Y2 399 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-210ENST00000580713 ARRDC4Q8NCT1 418 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 FAM122AQ96E09 287 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 RNPC3Q96LT9 517 aaKnown RBP13.22□□□□□ -0.29
TOP3A-210ENST00000580713 NOL10Q9BSC4 688 aaKnown RBP13.22□□□□□ -0.29
TOP3A-210ENST00000580713 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 PI4KBQ9UBF8 816 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 PA2G4Q9UQ80 394 aaKnown RBP13.22□□□□□ -0.29
TOP3A-210ENST00000580713 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
TOP3A-210ENST00000580713 ATAD5Q96QE3 1844 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 SLC15A5A6NIM6 579 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 GDF11O95390 407 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
TOP3A-210ENST00000580713 USP38Q8NB14 1042 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 RABGAP1Q9Y3P9 1069 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 MAST2Q6P0Q8 1798 aa13.21□□□□□ -0.29
TOP3A-210ENST00000580713 PTPRCP08575 1304 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
TOP3A-210ENST00000580713 UBTFL1P0CB47 393 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-210ENST00000580713 PTPREP23469 700 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 PLA2G5P39877 138 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 JAG1P78504 1218 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
TOP3A-210ENST00000580713 SHROOM1Q2M3G4 852 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L2Q6R6M4 530 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 TBC1D9Q6ZT07 1266 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 SH3RF1Q7Z6J0 888 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 NPLOC4Q8TAT6 608 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 ZNF384Q8TF68 577 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 DHX36Q9H2U1 1008 aaKnown RBP13.2□□□□□ -0.3
TOP3A-210ENST00000580713 PDLIM7Q9NR12 457 aa13.2□□□□□ -0.3
TOP3A-210ENST00000580713 TRIM43BA6NCK2 446 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
TOP3A-210ENST00000580713 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 POTEEQ6S8J3 1075 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 SH3RF3Q8TEJ3 882 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-210ENST00000580713 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 TRIM43Q96BQ3 446 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-210ENST00000580713 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
TOP3A-210ENST00000580713 XAGE2Q96GT9 111 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 NEUROD6Q96NK8 337 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 FEZ1Q99689 392 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
TOP3A-210ENST00000580713 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 CNMDO75829 334 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 ADCYAP1R1P41586 468 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 DPP9Q86TI2 863 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 FOXP4Q8IVH2 680 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-210ENST00000580713 MAPKAPK5Q8IW41 473 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 HMG20BQ9P0W2 317 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
TOP3A-210ENST00000580713 BAG3O95817 575 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 HOXC6P09630 235 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 CYBAP13498 195 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 DNAJB2P25686 324 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 TLE2Q04725 743 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 GRB14Q14449 540 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 PI16Q6UXB8 463 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 SPATA5Q8NB90 893 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 TGFBRAP1Q8WUH2 860 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-210ENST00000580713 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 LRP2BPQ9P2M1 347 aa13.17□□□□□ -0.3
TOP3A-210ENST00000580713 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-210ENST00000580713 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-210ENST00000580713 RAG1P15918 1043 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 PLCG2P16885 1265 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 EPHB4P54760 987 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 TFCP2Q12800 502 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 ATXN2LQ8WWM7 1075 aaKnown RBP13.16□□□□□ -0.3
TOP3A-210ENST00000580713 ZNF576Q9H609 170 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
TOP3A-210ENST00000580713 SAP30BPQ9UHR5 308 aaKnown RBP13.16□□□□□ -0.3
TOP3A-210ENST00000580713 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
TOP3A-210ENST00000580713 SEPT4O43236 478 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms