RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 IGKV6D-41A0A0C4DH26 115 aa16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 IQCA1LA6NCM1 817 aa16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 DHX16O60231 1041 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 DTNBO60941 627 aa16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 GDF11O95390 407 aa16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 DDIT3P35638 169 aa16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 LLPHQ9BRT6 129 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CPLX1O14810 134 aa16.17■□□□□ 0.18
CDK5RAP3-219ENST00000580670 DDAH1O94760 285 aa16.17■□□□□ 0.18
CDK5RAP3-219ENST00000580670 RCAN1P53805 252 aa16.17■□□□□ 0.18
CDK5RAP3-219ENST00000580670 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
CDK5RAP3-219ENST00000580670 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-219ENST00000580670 TMEM47Q9BQJ4 181 aa16.17■□□□□ 0.18
CDK5RAP3-219ENST00000580670 SCN4AP35499 1836 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CALM1P0DP23 149 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CALM2P0DP24 149 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CALM3P0DP25 149 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 GJB2P29033 226 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CDC27P30260 824 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 MAP3K10Q02779 954 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 RTN1Q16799 776 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 NBPF12Q5TAG4 269 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 TMEM179Q6ZVK1 233 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CLEC10AQ8IUN9 316 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 PNMA1Q8ND90 353 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 NSUN7Q8NE18 718 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 PPP2R3BQ9Y5P8 575 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 NID2Q14112 1375 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 GREB1LQ9C091 1923 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 WDR90Q96KV7 1748 aa16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 POLR2AP24928 1970 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-219ENST00000580670 POTECB2RU33 542 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 JAK2O60674 1132 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CTDNEP1O95476 244 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 TTLL1O95922 423 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 NOVP48745 357 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 TROAPQ12815 778 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 PPP4R3BQ5MIZ7 849 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 PRAMEF18Q5VWM3 479 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 FANCBQ8NB91 859 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CABP5Q9NP86 173 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 FAM217BQ9NTX9 383 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CHMP5Q9NZZ3 219 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CIZ1Q9ULV3 898 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 GH2P01242 217 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 EAPPQ56P03 285 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 SULF1Q8IWU6 871 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 HOOK2Q96ED9 719 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 KANSL2Q9H9L4 492 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CLIP2Q9UDT6 1046 aa16.15■□□□□ 0.18
CDK5RAP3-219ENST00000580670 CCDC196A0A1B0GTZ2 297 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 JAG1P78504 1218 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ATP2B2Q01814 1243 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SEPT2Q15019 361 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 DCAF15Q66K64 600 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CPLX2Q6PUV4 134 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SMARCC2Q8TAQ2 1214 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ZC3H15Q8WU90 426 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 DDX11Q96FC9 970 aa16.14■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CDKL5O76039 1030 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 GUCY1A2P33402 732 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 HMGN5P82970 282 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PPP2R5BQ15173 497 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CAP2P40123 477 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ICA1Q05084 483 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 KRT26Q7Z3Y9 468 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 RBM28Q9NW13 759 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 NYAP2Q9P242 653 aa16.13■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 EEF2P13639 858 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 KIF5BP33176 963 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 NTRK3Q16288 839 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SUPT20HL1Q3ZLR7 823 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 FAM184AQ8NB25 1140 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 MAP3K14Q99558 947 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ZBTB21Q9ULJ3 1066 aa16.12■□□□□ 0.17
CDK5RAP3-219ENST00000580670 GRM4Q14833 912 aa16.11■□□□□ 0.17
CDK5RAP3-219ENST00000580670 MYH4Q9Y623 1939 aa16.11■□□□□ 0.17
CDK5RAP3-219ENST00000580670 IFNAR1P17181 557 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 NUCB2P80303 420 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PKP1Q13835 747 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 DLK2Q6UY11 383 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CMTR1Q8N1G2 835 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PHKBQ93100 1093 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms