RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TROAPQ12815 778 aa23.48■■□□□ 1.35
SMG8-203ENST00000578922 CCDC183Q5T5S1 534 aa23.48■■□□□ 1.35
SMG8-203ENST00000578922 PRMT6Q96LA8 375 aaPredicted RBP23.48■■□□□ 1.35
SMG8-203ENST00000578922 PRKCSHP14314 528 aaPredicted RBP23.48■■□□□ 1.35
SMG8-203ENST00000578922 IFNAR1P17181 557 aa23.48■■□□□ 1.35
SMG8-203ENST00000578922 STX8Q9UNK0 236 aa23.48■■□□□ 1.35
SMG8-203ENST00000578922 MTMR7Q9Y216 660 aa23.48■■□□□ 1.35
SMG8-203ENST00000578922 CCDC196A0A1B0GTZ2 297 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 RRP9O43818 475 aaKnown RBP23.47■■□□□ 1.35
SMG8-203ENST00000578922 GUCY1A2P33402 732 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 KAT14Q9H8E8 782 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 ECM29Q5VYK3 1845 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 FMNL1O95466 1100 aaPredicted RBP23.47■■□□□ 1.35
SMG8-203ENST00000578922 RCAN1P53805 252 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 FBXO18Q8NFZ0 1043 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 VPS33BQ9H267 617 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 FAM198AQ9UFP1 575 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 SRCAPQ6ZRS2 3230 aa23.47■■□□□ 1.35
SMG8-203ENST00000578922 PLEKHA8P1O95397 391 aa23.46■■□□□ 1.35
SMG8-203ENST00000578922 KRT85P78386 507 aa23.46■■□□□ 1.35
SMG8-203ENST00000578922 RASSF7Q02833 373 aa23.46■■□□□ 1.35
SMG8-203ENST00000578922 ZSCAN29Q8IWY8 852 aaPredicted RBP23.46■■□□□ 1.35
SMG8-203ENST00000578922 ZSCAN16Q9H4T2 348 aaPredicted RBP23.46■■□□□ 1.35
SMG8-203ENST00000578922 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.46■■□□□ 1.35
SMG8-203ENST00000578922 SERPINB13Q9UIV8 391 aa23.46■■□□□ 1.35
SMG8-203ENST00000578922 MYO3BQ8WXR4 1341 aa23.45■■□□□ 1.35
SMG8-203ENST00000578922 DDAH1O94760 285 aa23.45■■□□□ 1.35
SMG8-203ENST00000578922 CXCL9Q07325 125 aa23.45■■□□□ 1.35
SMG8-203ENST00000578922 NBPF11Q86T75 865 aa23.45■■□□□ 1.35
SMG8-203ENST00000578922 CRACR2BQ8N4Y2 399 aaPredicted RBP23.45■■□□□ 1.35
SMG8-203ENST00000578922 JDP2Q8WYK2 163 aa23.45■■□□□ 1.35
SMG8-203ENST00000578922 hCG_1642624A0A1W2PR95 340 aa23.45■■□□□ 1.34
SMG8-203ENST00000578922 GABPAQ06546 454 aa23.45■■□□□ 1.34
SMG8-203ENST00000578922 DGKHQ86XP1 1220 aa23.45■■□□□ 1.34
SMG8-203ENST00000578922 TRIM22Q8IYM9 498 aa23.45■■□□□ 1.34
SMG8-203ENST00000578922 GMLQ99445 158 aa23.45■■□□□ 1.34
SMG8-203ENST00000578922 PSME4Q14997 1843 aa23.45■■□□□ 1.34
SMG8-203ENST00000578922 FER1L6Q2WGJ9 1857 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 DDTLA6NHG4 134 aaPredicted RBP23.44■■□□□ 1.34
SMG8-203ENST00000578922 FAM196BA6NMK8 535 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 HLA-DOAP06340 250 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 CALM1P0DP23 149 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 CALM2P0DP24 149 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 CALM3P0DP25 149 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 OGFOD1Q8N543 542 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 PNMA1Q8ND90 353 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 CEBPZQ03701 1054 aaKnown RBP23.44■■□□□ 1.34
SMG8-203ENST00000578922 RNF214Q8ND24 703 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 NEDD1Q8NHV4 660 aa23.44■■□□□ 1.34
SMG8-203ENST00000578922 CTCFLQ8NI51 663 aaPredicted RBP23.44■■□□□ 1.34
SMG8-203ENST00000578922 CLRN2A0PK11 232 aa23.43■■□□□ 1.34
SMG8-203ENST00000578922 KRT40Q6A162 431 aa23.43■■□□□ 1.34
SMG8-203ENST00000578922 IDI2Q9BXS1 227 aa23.43■■□□□ 1.34
SMG8-203ENST00000578922 TCP11L1Q9NUJ3 509 aa23.43■■□□□ 1.34
SMG8-203ENST00000578922 HDAC9Q9UKV0 1011 aa23.43■■□□□ 1.34
SMG8-203ENST00000578922 STK36Q9NRP7 1315 aa23.43■■□□□ 1.34
SMG8-203ENST00000578922 AKR1B1P15121 316 aa23.42■■□□□ 1.34
SMG8-203ENST00000578922 SH3BP5LQ7L8J4 393 aa23.42■■□□□ 1.34
SMG8-203ENST00000578922 CEP95Q96GE4 821 aa23.42■■□□□ 1.34
SMG8-203ENST00000578922 TMEM47Q9BQJ4 181 aa23.42■■□□□ 1.34
SMG8-203ENST00000578922 NT5C2P49902 561 aa23.42■■□□□ 1.34
SMG8-203ENST00000578922 DLGAP5Q15398 846 aa23.42■■□□□ 1.34
SMG8-203ENST00000578922 FTOQ9C0B1 505 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMG8-203ENST00000578922 RBM28Q9NW13 759 aaKnown RBP23.42■■□□□ 1.34
SMG8-203ENST00000578922 SPDYE2BA6NHP3 402 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 KIF28PB7ZC32 967 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 SPDYE6P0CI01 402 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 TRIM29Q14134 588 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 PPP2R5BQ15173 497 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 CCDC178Q5BJE1 867 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 CIAPIN1Q6FI81 312 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 PIBF1Q8WXW3 757 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 SPON1Q9HCB6 807 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 TCP10L2B9ZVM9 353 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 SHMT1P34896 483 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 TMTC3Q6ZXV5 915 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 RASGRP2Q7LDG7 609 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 CLEC10AQ8IUN9 316 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 ANKS1AQ92625 1134 aa23.41■■□□□ 1.34
SMG8-203ENST00000578922 SHTN1A0MZ66 631 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 EIF6P56537 245 aaKnown RBP23.4■■□□□ 1.34
SMG8-203ENST00000578922 AKAP17AQ02040 695 aaKnown RBP23.4■■□□□ 1.34
SMG8-203ENST00000578922 SRBD1Q8N5C6 995 aaKnown RBP23.4■■□□□ 1.34
SMG8-203ENST00000578922 SPATA32Q96LK8 384 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.4■■□□□ 1.34
SMG8-203ENST00000578922 V9GY48 417 aaPredicted RBP23.4■■□□□ 1.34
SMG8-203ENST00000578922 DEXIO95424 95 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 PRELPP51888 382 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 FUT2Q10981 343 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 HSP90AA2PQ14568 343 aaPredicted RBP23.4■■□□□ 1.34
SMG8-203ENST00000578922 WASF1Q92558 559 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 DNAJC18Q9H819 358 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 SWAP70Q9UH65 585 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 KCNJ14Q9UNX9 436 aa23.4■■□□□ 1.34
SMG8-203ENST00000578922 MPHOSPH10O00566 681 aaKnown RBP23.39■■□□□ 1.33
SMG8-203ENST00000578922 KIF23Q02241 960 aaPredicted RBP23.39■■□□□ 1.33
SMG8-203ENST00000578922 AGBL3Q8NEM8 1001 aa23.39■■□□□ 1.33
SMG8-203ENST00000578922 UBE2Q2Q8WVN8 375 aa23.39■■□□□ 1.33
SMG8-203ENST00000578922 DHX36Q9H2U1 1008 aaKnown RBP23.39■■□□□ 1.33
SMG8-203ENST00000578922 BAZ2BQ9UIF8 2168 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms