RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 LIFRP42702 1097 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 VGLL4Q14135 290 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 WTAPQ15007 396 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 NFXL1Q6ZNB6 911 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 SAPCD2Q86UD0 394 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 BRF1Q92994 677 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 ZKSCAN4Q969J2 545 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 CCDC17Q96LX7 622 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 CREBZFQ9NS37 354 aa16.33■□□□□ 0.2
CSNK1D-209ENST00000578904 CCDC69A6NI79 296 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 DHX16O60231 1041 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 CTNND1O60716 968 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 CAP2P40123 477 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 NOL9Q5SY16 702 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 LDLRAD1Q5T700 205 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 SCYL3Q8IZE3 742 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 INTS4Q96HW7 963 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 CLMNQ96JQ2 1002 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 TCEANC2Q96MN5 208 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 ELP3Q9H9T3 547 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 PICK1Q9NRD5 415 aa16.32■□□□□ 0.2
CSNK1D-209ENST00000578904 ATAD5Q96QE3 1844 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 UNCXA6NJT0 531 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 AKR1B1P15121 316 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 RASA1P20936 1047 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 ABCB5Q2M3G0 1257 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 CYB5R4Q7L1T6 521 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 ZSCAN10Q96SZ4 725 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 CABP5Q9NP86 173 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 SNCAIPQ9Y6H5 919 aa16.31■□□□□ 0.2
CSNK1D-209ENST00000578904 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 GH2P01242 217 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 ASNSP08243 561 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 EVCP57679 992 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 TFAP4Q01664 338 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 SHROOM1Q2M3G4 852 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 PAXIP1Q6ZW49 1069 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 INCENPQ9NQS7 918 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 GINM1Q9NU53 330 aa16.3■□□□□ 0.2
CSNK1D-209ENST00000578904 CALM1P0DP23 149 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 CALM2P0DP24 149 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 CALM3P0DP25 149 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 ZNF157P51786 506 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 RCAN1P53805 252 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 ANTXR2P58335 489 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 CUL4AQ13619 759 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 PPP2R5BQ15173 497 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 RGMBQ6NW40 437 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 TMEM179Q6ZVK1 233 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 SGMS1Q86VZ5 419 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 IGDCC4Q8TDY8 1250 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 KIF3AQ9Y496 699 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 PCNTO95613 3336 aa16.29■□□□□ 0.2
CSNK1D-209ENST00000578904 TNKSO95271 1327 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 KLF18A0A0U1RQI7 1052 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 JAG1P78504 1218 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 FAM47AQ5JRC9 791 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 CATIPQ7Z7H3 387 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 HHIPL1Q96JK4 782 aa16.28■□□□□ 0.2
CSNK1D-209ENST00000578904 PLIN4Q96Q06 1357 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 ZBTB43O43298 467 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 PFKFB2O60825 505 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 PTPRAP18433 802 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 SEPT2Q15019 361 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms