RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 GRK4P32298 578 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 REC114Q7Z4M0 266 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 KIAA0825Q8IV33 1275 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.51□□□□□ -1.21
PTPRM-207ENST00000578571 EAF1Q96JC9 268 aaPredicted RBP7.51□□□□□ -1.21
PTPRM-207ENST00000578571 MFSD14AQ96MC6 490 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 PSMG3-AS1Q96PY0 264 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 DBNDD2Q9BQY9 259 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 SPON2Q9BUD6 331 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 UBP1Q9NZI7 540 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
PTPRM-207ENST00000578571 MAP3K4Q9Y6R4 1608 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 FANCAO15360 1455 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 NEO1Q92859 1461 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 ROBO2Q9HCK4 1378 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 GSC2O15499 205 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 ETF1P62495 437 aaKnown RBP7.5□□□□□ -1.21
PTPRM-207ENST00000578571 ZAR1Q86SH2 424 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 ZNF654Q8IZM8 581 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 ZNF507Q8TCN5 953 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 NT5C1AQ9BXI3 368 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 SSU72Q9NP77 194 aaKnown RBP7.5□□□□□ -1.21
PTPRM-207ENST00000578571 CORINQ9Y5Q5 1042 aa7.5□□□□□ -1.21
PTPRM-207ENST00000578571 GPATCH8Q9UKJ3 1502 aaKnown RBP7.49□□□□□ -1.21
PTPRM-207ENST00000578571 F13BP05160 661 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 CDK5R2Q13319 367 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 SLBPQ14493 270 aaKnown RBP eCLIP7.49□□□□□ -1.21
PTPRM-207ENST00000578571 NKG7Q16617 165 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 DIEXFQ68CQ4 756 aaKnown RBP7.49□□□□□ -1.21
PTPRM-207ENST00000578571 SLC51AQ86UW1 340 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.49□□□□□ -1.21
PTPRM-207ENST00000578571 FGD6Q6ZV73 1430 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 CDC42BPAQ5VT25 1732 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 PRR36Q9H6K5 1346 aa7.49□□□□□ -1.21
PTPRM-207ENST00000578571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPRM-207ENST00000578571 KIF13AQ9H1H9 1805 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 GRIN3BO60391 1043 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 CAP2P40123 477 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 FAM50AQ14320 339 aaKnown RBP7.48□□□□□ -1.21
PTPRM-207ENST00000578571 CWF19L2Q2TBE0 894 aaKnown RBP7.48□□□□□ -1.21
PTPRM-207ENST00000578571 CDC37L1Q7L3B6 337 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 ZDHHC13Q8IUH4 622 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 FBXL6Q8N531 539 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 KCT2Q8NC54 265 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 SHKBP1Q8TBC3 707 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 TGIF2Q9GZN2 237 aa7.48□□□□□ -1.21
PTPRM-207ENST00000578571 PGRP06401 933 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 APOBRQ0VD83 1088 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 SEZ6Q53EL9 994 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 HID1Q8IV36 788 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 SLITRK4Q8IW52 837 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 ACSF2Q96CM8 615 aaPredicted RBP7.47□□□□□ -1.21
PTPRM-207ENST00000578571 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 TJP2Q9UDY2 1190 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 PTPN23Q9H3S7 1636 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 ADGRL1O94910 1474 aa7.47□□□□□ -1.21
PTPRM-207ENST00000578571 AKNAQ7Z591 1439 aa7.46□□□□□ -1.21
PTPRM-207ENST00000578571 RRBP1Q9P2E9 1410 aaKnown RBP7.46□□□□□ -1.21
PTPRM-207ENST00000578571 KIAA1107Q9UPP5 1409 aa7.46□□□□□ -1.21
PTPRM-207ENST00000578571 PRR19A6NJB7 356 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 FAM170BA6NMN3 283 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 WDR64B1ANS9 1081 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 HTR3BO95264 441 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 TSPY4P0CV99 314 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 TSPY10P0CW01 314 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 PDE4BQ07343 736 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 PAK2Q13177 524 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 ARMCX6Q7L4S7 300 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 NKD1Q969G9 470 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 ACBD3Q9H3P7 528 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 CAMSAP2Q08AD1 1489 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 TSPOAP1O95153 1857 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 CDC42BPBQ9Y5S2 1711 aa7.46□□□□□ -1.22
PTPRM-207ENST00000578571 DENND4BO75064 1496 aaPredicted RBP7.45□□□□□ -1.22
PTPRM-207ENST00000578571 TCOF1Q13428 1488 aaKnown RBP7.45□□□□□ -1.22
PTPRM-207ENST00000578571 ZNF518AQ6AHZ1 1483 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 CCDC141Q6ZP82 1450 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 LEFTY1O75610 366 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 FAM87AP0C7U9 286 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 PLCG1P19174 1290 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 ERCC5P28715 1186 aaPredicted RBP7.45□□□□□ -1.22
PTPRM-207ENST00000578571 TMEM201Q5SNT2 666 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 OGFOD3Q6PK18 319 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 ZNF765Q7L2R6 523 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 MRPL41Q8IXM3 137 aaKnown RBP7.45□□□□□ -1.22
PTPRM-207ENST00000578571 TMEM87BQ96K49 555 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 DUSP23Q9BVJ7 150 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 FOXQ1Q9C009 403 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 REV1Q9UBZ9 1251 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 ABCC1P33527 1531 aa7.45□□□□□ -1.22
PTPRM-207ENST00000578571 SCAPERQ9BY12 1400 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 DNAJA2O60884 412 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 LRIG2O94898 1065 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 ATE1O95260 518 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 CST3P01034 146 aaPredicted RBP7.44□□□□□ -1.22
PTPRM-207ENST00000578571 PRAMEF13Q5VWM6 474 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 MCATQ8IVS2 390 aaKnown RBP7.44□□□□□ -1.22
PTPRM-207ENST00000578571 REXO1Q8N1G1 1221 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms