RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 BCRP11274 1271 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 LACTBP83111 547 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 C16orf86Q6ZW13 317 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 DYNLL2Q96FJ2 89 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 CCDC17Q96LX7 622 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 HTATIP2Q9BUP3 242 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 CPA4Q9UI42 421 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 TRIOBPQ9H2D6 2365 aa16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 LOC285556D6RIA3 1793 aa16.33■□□□□ 0.21
CSNK1D-208ENST00000578501 HTTP42858 3142 aa16.33■□□□□ 0.21
CSNK1D-208ENST00000578501 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 GUCY1A2P33402 732 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 CDK8P49336 464 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 RAB3GAP1Q15042 981 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L2Q6R6M4 530 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 SLC44A5Q8NCS7 719 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 C12orf42Q96LP6 360 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
CSNK1D-208ENST00000578501 CYP2D7A0A087X1C5 515 aa16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 OSBPP22059 807 aa16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 USP14P54578 494 aa16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 NACAP1Q9BZK3 213 aa16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 BAZ2AQ9UIF9 1905 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 NR2E3Q9Y5X4 410 aa16.32■□□□□ 0.2
CSNK1D-208ENST00000578501 ROBO3Q96MS0 1386 aa16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 SMIM22K7EJ46 135 aa16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 APPP05067 770 aa16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 SEPT2Q15019 361 aa16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 ASCC2Q9H1I8 757 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-208ENST00000578501 A0A1W2PPC1 479 aa16.3■□□□□ 0.2
CSNK1D-208ENST00000578501 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-208ENST00000578501 HOXD10P28358 340 aa16.3■□□□□ 0.2
CSNK1D-208ENST00000578501 TDO2P48775 406 aa16.3■□□□□ 0.2
CSNK1D-208ENST00000578501 FEZ1Q99689 392 aa16.3■□□□□ 0.2
CSNK1D-208ENST00000578501 CEP290O15078 2479 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 MINDY4BA8MYZ0 360 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 AKR1B1P15121 316 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 PSMC4P43686 418 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 FAM110CQ1W6H9 321 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 ACER1Q8TDN7 264 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 RILPL2Q969X0 211 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 ARHGAP39Q9C0H5 1083 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 ZNF287Q9HBT7 754 aa16.29■□□□□ 0.2
CSNK1D-208ENST00000578501 CTGFP29279 349 aa16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 GTF3C2Q8WUA4 911 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 NAPBQ9H115 298 aa16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 BRCA2P51587 3418 aa16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 CENPFP49454 3210 aa16.28■□□□□ 0.2
CSNK1D-208ENST00000578501 A0A1W2PRG0 241 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L15C9J2P7 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L11C9JVI0 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L18D6R9N7 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L22D6RA61 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L19D6RCP7 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L20D6RJB6 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 FOXP2O15409 715 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 GJB1P08034 283 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 SDSP20132 328 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 PDE4AP27815 886 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 GJA8P48165 433 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 FCGRTP55899 365 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 USP17L24Q0WX57 530 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 ALX1Q15699 326 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 CCDC129Q6ZRS4 1044 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 SIAH1Q8IUQ4 282 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 ANKRD13CQ8N6S4 541 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 FAM227BQ96M60 508 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 PRO3102Q9H379 93 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 SH2D4AQ9H788 454 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 MKNK2Q9HBH9 465 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 ARHGEF10LQ9HCE6 1279 aa16.27■□□□□ 0.2
CSNK1D-208ENST00000578501 A0A0D9SFI3 127 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 HIP1O00291 1037 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 SLC3A2P08195 630 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 CAPN2P17655 700 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 VCAM1P19320 739 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 RASA1P20936 1047 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 HERVK_113P62684 666 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms