RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 ANTXR1Q9H6X2 564 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 PRDM5Q9NQX1 630 aaPredicted RBP3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 PIM2Q9P1W9 311 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 CEP131Q9UPN4 1083 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 MAPK8IP1Q9UQF2 711 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 LEMD3Q9Y2U8 911 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 PRR19A6NJB7 356 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 IGF2BP3O00425 579 aaKnown RBP eCLIP3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 TNFRSF10CO14798 259 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 ADAM23O75077 832 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 EOMESO95936 686 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 GRIK1P39086 918 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 ETV3P41162 512 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 CHMP4BP1P59074 171 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 FAM214BQ7L5A3 538 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 CDH24Q86UP0 819 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 LSRQ86X29 649 aaPredicted RBP3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 C19orf47Q8N9M1 422 aaKnown RBP3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 RIN3Q8TB24 985 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 PPP1R13LQ8WUF5 828 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 KIF2CQ99661 725 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 MKNK2Q9HBH9 465 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 TPX2Q9ULW0 747 aaKnown RBP3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 RNF112Q9ULX5 631 aa3.53□□□□□ -1.84
PTP4A1-204ENST00000578299 CYP26A1O43174 497 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 UBOX5O94941 541 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 TGFB1P01137 390 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 FOSL1P15407 271 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 GUCY2CP25092 1073 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 ITGB7P26010 798 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 KIR3DL1P43629 444 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 SF3A1Q15459 793 aaKnown RBP3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 SFRP5Q5T4F7 317 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 INTS5Q6P9B9 1019 aaKnown RBP3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 ARHGAP27Q6ZUM4 889 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 C22orf34Q6ZV56 151 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 BAHD1Q8TBE0 780 aaPredicted RBP3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 ANAPC16Q96DE5 110 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 HEXIM2Q96MH2 286 aaKnown RBP3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 SLC9A7Q96T83 725 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 TANGO6Q9C0B7 1094 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.52□□□□□ -1.852e-13■■■□□ 15.4
PTP4A1-204ENST00000578299 LRRC4CQ9HCJ2 640 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 SLC12A7Q9Y666 1083 aa3.52□□□□□ -1.85
PTP4A1-204ENST00000578299 GNAT3A8MTJ3 354 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 COBLO75128 1261 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 ZNF865P0CJ78 1059 aaPredicted RBP3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 ACRP10323 421 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 ATP2B1P20020 1258 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 POLR2BP30876 1174 aaKnown RBP3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 CASP7P55210 303 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 RNF4P78317 190 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 TNNI3KQ59H18 835 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 RUFY4Q6ZNE9 571 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 RNF141Q8WVD5 230 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 SREK1Q8WXA9 508 aaKnown RBP3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 ARMC5Q96C12 935 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 DHRS1Q96LJ7 313 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 FBXL18Q96ME1 805 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 KREMEN1Q96MU8 473 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 ASPNQ9BXN1 380 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 PRKAG3Q9UGI9 489 aa3.51□□□□□ -1.85
PTP4A1-204ENST00000578299 COL17A1Q9UMD9 1497 aaPredicted RBP3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 A0A1W2PQH9 124 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 SMAD7O15105 426 aaKnown RBP3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 CLEC3AO75596 197 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 STK10O94804 968 aaKnown RBP3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 CBX7O95931 251 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 CEACAM5P06731 702 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 ETFBP38117 255 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 OXCT1P55809 520 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 IFI16Q16666 785 aaKnown RBP3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 BBS9Q3SYG4 887 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 UNC5AQ6ZN44 842 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 TTC6Q86TZ1 520 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 MFSD4AQ8N468 514 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 FAM169BQ8N8A8 192 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 FAM181AQ8N9Y4 354 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 PIWIL2Q8TC59 973 aaKnown RBP3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 NETO1Q8TDF5 533 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 VWCEQ96DN2 955 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 PHAXQ9H814 394 aaKnown RBP3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 ZNF408Q9H9D4 720 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 SUCOQ9UBS9 1254 aaKnown RBP3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 KCNH3Q9ULD8 1083 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 MRVI1Q9Y6F6 885 aa3.5□□□□□ -1.85
PTP4A1-204ENST00000578299 CNTNAP4Q9C0A0 1308 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 TMEM265A0A087WTH1 108 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 FAM155AB1AL88 458 aaPredicted RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 ITIH2P19823 946 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 HOXA10P31260 410 aaPredicted RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 CD97P48960 835 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 CLCN7P51798 805 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 PMS1P54277 932 aaKnown RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 ZYXQ15942 572 aaKnown RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 PPP2R5EQ16537 467 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 MSMPQ1L6U9 139 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 ZMYM1Q5SVZ6 1142 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 NBPF12Q5TAG4 269 aaPredicted RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 TMEM192Q8IY95 271 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms