RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 NRBP1Q9UHY1 535 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 DBNLQ9UJU6 430 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 PALD1Q9ULE6 856 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 STRNO43815 780 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 CNMDO75829 334 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 IGHA2P01877 340 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 GRB14Q14449 540 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 CERKLQ49MI3 558 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 LHX8Q68G74 356 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 EDC3Q96F86 508 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 GH2P01242 217 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 ABRAQ8N0Z2 381 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 FEZ1Q99689 392 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 SNRKQ9NRH2 765 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 SLC5A4Q9NY91 659 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 HTTP42858 3142 aa13.66□□□□□ -0.22
SMARCE1-214ENST00000578112 PFASO15067 1338 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 BCAR3O75815 825 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 GDF11O95390 407 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 JAG1P78504 1218 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 LPAR1Q92633 364 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 CHMP4BQ9H444 224 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 IVNS1ABPQ9Y6Y0 642 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 DNM1LO00429 736 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 MAGEA10P43363 369 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 TRIM32Q13049 653 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 CRNKL1Q9BZJ0 848 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 DDX20Q9UHI6 824 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-214ENST00000578112 GABPAQ06546 454 aa13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 SOX1O00570 391 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 VCAM1P19320 739 aa13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 COPB2P35606 906 aa13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 DYNLL1P63167 89 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 Q3C1V9 767 aa13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 MAGEB6Q8N7X4 407 aa13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 RIOK1Q9BRS2 568 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 PORCNQ9H237 461 aa13.64□□□□□ -0.23
SMARCE1-214ENST00000578112 ARRDC4Q8NCT1 418 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 PAGR1Q9BTK6 254 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 MROH8Q9H579 483 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 SAP30BPQ9UHR5 308 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 SHMT1P34896 483 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 C1orf53Q5VUE5 145 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 CEP85Q6P2H3 762 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 TMEM179Q6ZVK1 233 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 SLC17A8Q8NDX2 589 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
SMARCE1-214ENST00000578112 SPDYE16A6NNV3 312 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-214ENST00000578112 CCND3P30281 292 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-214ENST00000578112 ATP2B2Q01814 1243 aa13.62□□□□□ -0.23
SMARCE1-214ENST00000578112 COG2Q14746 738 aa13.62□□□□□ -0.23
SMARCE1-214ENST00000578112 CLUAP1Q96AJ1 413 aa13.62□□□□□ -0.23
SMARCE1-214ENST00000578112 ZMYND8Q9ULU4 1186 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-214ENST00000578112 LTBP2Q14767 1821 aa13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 RAB11FIP3O75154 756 aa13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 HMMRO75330 724 aa13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 CYBAP13498 195 aa13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 POTEEQ6S8J3 1075 aa13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 CCDC8Q9H0W5 538 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 TNNQ9UQP3 1299 aa13.61□□□□□ -0.23
SMARCE1-214ENST00000578112 MYH8P13535 1937 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 SLC25A27O95847 323 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 SNX17Q15036 470 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 ARHGEF10LQ9HCE6 1279 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 ATP8A2Q9NTI2 1148 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 RLFQ13129 1914 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 RAB3GAP1Q15042 981 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 LRRC26Q2I0M4 334 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 AACSQ86V21 672 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 LRCH3Q96II8 777 aa13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-214ENST00000578112 GUCY1A2P33402 732 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 CCL14Q16627 93 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 AMOTL1Q8IY63 956 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 CLASRPQ8N2M8 674 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 MIGA1Q8NAN2 632 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 MTMR10Q9NXD2 777 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 BTBD7Q9P203 1132 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 PRKAG2Q9UGJ0 569 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 PARP14Q460N5 1801 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 WDR46O15213 610 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms