RNA–Protein interactions for RNA: ENST00000578016.1

CYB561-208, Transcript of cytochrome b561, humanhuman

TSL 4

Gene CYB561, Length 530 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-208ENST00000578016 ERO1AQ96HE7 468 aa23.31■■□□□ 1.32
CYB561-208ENST00000578016 CCDC17Q96LX7 622 aa23.31■■□□□ 1.32
CYB561-208ENST00000578016 GSPT1P15170 499 aaKnown RBP23.3■■□□□ 1.32
CYB561-208ENST00000578016 PABPC4Q13310 644 aaKnown RBP eCLIP23.3■■□□□ 1.32
CYB561-208ENST00000578016 USP17L2Q6R6M4 530 aa23.3■■□□□ 1.32
CYB561-208ENST00000578016 ACER1Q8TDN7 264 aa23.3■■□□□ 1.32
CYB561-208ENST00000578016 MCOLN1Q9GZU1 580 aa23.3■■□□□ 1.32
CYB561-208ENST00000578016 SLC45A1Q9Y2W3 748 aa23.3■■□□□ 1.32
CYB561-208ENST00000578016 SLC3A2P08195 630 aaKnown RBP23.29■■□□□ 1.32
CYB561-208ENST00000578016 MFAP1P55081 439 aaKnown RBP23.29■■□□□ 1.32
CYB561-208ENST00000578016 ZNF589Q86UQ0 364 aaPredicted RBP23.29■■□□□ 1.32
CYB561-208ENST00000578016 PNMA3Q9UL41 463 aa23.29■■□□□ 1.32
CYB561-208ENST00000578016 CCDC171Q6TFL3 1326 aa23.29■■□□□ 1.32
CYB561-208ENST00000578016 ECM2O94769 699 aaPredicted RBP23.28■■□□□ 1.32
CYB561-208ENST00000578016 OSBPP22059 807 aa23.28■■□□□ 1.32
CYB561-208ENST00000578016 PPARAQ07869 468 aa23.28■■□□□ 1.32
CYB561-208ENST00000578016 SMCR8Q8TEV9 937 aaPredicted RBP23.28■■□□□ 1.32
CYB561-208ENST00000578016 ZNF287Q9HBT7 754 aa23.28■■□□□ 1.32
CYB561-208ENST00000578016 EMILIN3Q9NT22 766 aa23.28■■□□□ 1.32
CYB561-208ENST00000578016 FOXP2O15409 715 aa23.27■■□□□ 1.32
CYB561-208ENST00000578016 PRDM1O75626 825 aa23.27■■□□□ 1.32
CYB561-208ENST00000578016 USP14P54578 494 aa23.27■■□□□ 1.32
CYB561-208ENST00000578016 ATP2B2Q01814 1243 aa23.27■■□□□ 1.32
CYB561-208ENST00000578016 KIF22Q14807 665 aa23.27■■□□□ 1.32
CYB561-208ENST00000578016 C17orf99Q6UX52 265 aa23.27■■□□□ 1.32
CYB561-208ENST00000578016 CLEC10AQ8IUN9 316 aa23.27■■□□□ 1.32
CYB561-208ENST00000578016 ZNF444Q8N0Y2 327 aaPredicted RBP23.27■■□□□ 1.32
CYB561-208ENST00000578016 ROBO3Q96MS0 1386 aa23.27■■□□□ 1.31
CYB561-208ENST00000578016 HSPD1P10809 573 aaKnown RBP23.26■■□□□ 1.31
CYB561-208ENST00000578016 RASA1P20936 1047 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 IRX3P78415 501 aaPredicted RBP23.26■■□□□ 1.31
CYB561-208ENST00000578016 ICA1Q05084 483 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 CTDSPL2Q05D32 466 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 PDE4BQ07343 736 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 ALX1Q15699 326 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 ARHGEF10LQ9HCE6 1279 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 TRIM17Q9Y577 477 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 LOC285556D6RIA3 1793 aa23.26■■□□□ 1.31
CYB561-208ENST00000578016 ARHGEF6Q15052 776 aa23.25■■□□□ 1.31
CYB561-208ENST00000578016 KIAA1683Q9H0B3 1180 aa23.25■■□□□ 1.31
CYB561-208ENST00000578016 ASCC2Q9H1I8 757 aaPredicted RBP23.25■■□□□ 1.31
CYB561-208ENST00000578016 EFCC1Q9HA90 598 aa23.25■■□□□ 1.31
CYB561-208ENST00000578016 ADGRA2Q96PE1 1338 aa23.25■■□□□ 1.31
CYB561-208ENST00000578016 FGAP02671 866 aa23.24■■□□□ 1.31
CYB561-208ENST00000578016 SKAP1Q86WV1 359 aa23.24■■□□□ 1.31
CYB561-208ENST00000578016 KANSL2Q9H9L4 492 aa23.24■■□□□ 1.31
CYB561-208ENST00000578016 A0A1W2PRG0 241 aa23.23■■□□□ 1.31
CYB561-208ENST00000578016 OTOP1Q7RTM1 612 aa23.23■■□□□ 1.31
CYB561-208ENST00000578016 ABHD8Q96I13 439 aa23.23■■□□□ 1.31
CYB561-208ENST00000578016 EEF2P13639 858 aaKnown RBP23.22■■□□□ 1.31
CYB561-208ENST00000578016 HOXA7P31268 230 aaPredicted RBP23.22■■□□□ 1.31
CYB561-208ENST00000578016 LACTBP83111 547 aaPredicted RBP23.22■■□□□ 1.31
CYB561-208ENST00000578016 PKN2Q16513 984 aaKnown RBP23.22■■□□□ 1.31
CYB561-208ENST00000578016 C12orf42Q96LP6 360 aa23.22■■□□□ 1.31
CYB561-208ENST00000578016 P2RX7Q99572 595 aaKnown RBP23.22■■□□□ 1.31
CYB561-208ENST00000578016 ARHGAP39Q9C0H5 1083 aa23.22■■□□□ 1.31
CYB561-208ENST00000578016 SH2D4AQ9H788 454 aa23.22■■□□□ 1.31
CYB561-208ENST00000578016 USP17L15C9J2P7 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L13C9JLJ4 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L11C9JVI0 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L18D6R9N7 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L22D6RA61 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L17D6RBQ6 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L19D6RCP7 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L20D6RJB6 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 RAD21O60216 631 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 BCRP11274 1271 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 USP17L24Q0WX57 530 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 FAM47AQ5JRC9 791 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 SIAH1Q8IUQ4 282 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 ANKRD13CQ8N6S4 541 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 RUFY2Q8WXA3 655 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 INCENPQ9NQS7 918 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 TOMM22Q9NS69 142 aa23.21■■□□□ 1.31
CYB561-208ENST00000578016 FMNL1O95466 1100 aaPredicted RBP23.2■■□□□ 1.3
CYB561-208ENST00000578016 TSPY3P0CV98 308 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 TSPY8P0CW00 308 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 VCAM1P19320 739 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 CHMLP26374 656 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 PSMC4P43686 418 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 GCLCP48506 637 aaPredicted RBP23.2■■□□□ 1.3
CYB561-208ENST00000578016 HAND2P61296 217 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 CAP1Q01518 475 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 TFAP4Q01664 338 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.2■■□□□ 1.3
CYB561-208ENST00000578016 ANAPC4Q9UJX5 808 aa23.2■■□□□ 1.3
CYB561-208ENST00000578016 FBXO46Q6PJ61 603 aaPredicted RBP23.19■■□□□ 1.3
CYB561-208ENST00000578016 RPAP3Q9H6T3 665 aaPredicted RBP23.19■■□□□ 1.3
CYB561-208ENST00000578016 TMX2Q9Y320 296 aa23.19■■□□□ 1.3
CYB561-208ENST00000578016 HERVK_113P62684 666 aa23.18■■□□□ 1.3
CYB561-208ENST00000578016 RRP12Q5JTH9 1297 aaKnown RBP23.18■■□□□ 1.3
CYB561-208ENST00000578016 CATSPERGQ6ZRH7 1159 aa23.18■■□□□ 1.3
CYB561-208ENST00000578016 SPICE1Q8N0Z3 855 aa23.18■■□□□ 1.3
CYB561-208ENST00000578016 CLIP2Q9UDT6 1046 aa23.18■■□□□ 1.3
CYB561-208ENST00000578016 ZMYM6O95789 1325 aa23.17■■□□□ 1.3
CYB561-208ENST00000578016 TSPY2A6NKD2 308 aa23.17■■□□□ 1.3
CYB561-208ENST00000578016 RANBP6O60518 1105 aaKnown RBP23.17■■□□□ 1.3
CYB561-208ENST00000578016 NEDD1Q8NHV4 660 aa23.17■■□□□ 1.3
CYB561-208ENST00000578016 TANGO6Q9C0B7 1094 aa23.17■■□□□ 1.3
CYB561-208ENST00000578016 VCPKMTQ9H867 229 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms