RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 AMOTL1Q8IY63 956 aa10.05□□□□□ -0.8
DDX42-204ENST00000577940 DDRGK1Q96HY6 314 aa10.05□□□□□ -0.8
DDX42-204ENST00000577940 HAUS7Q99871 368 aa10.05□□□□□ -0.8
DDX42-204ENST00000577940 BOLA2Q9H3K6 86 aa10.05□□□□□ -0.8
DDX42-204ENST00000577940 EMILIN3Q9NT22 766 aa10.05□□□□□ -0.8
DDX42-204ENST00000577940 ZNF532Q9HCE3 1301 aa10.05□□□□□ -0.8
DDX42-204ENST00000577940 PDE4DIPQ5VU43 2346 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 SGPL1O95470 568 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 TFRCP02786 760 aaKnown RBP10.04□□□□□ -0.8
DDX42-204ENST00000577940 INHAP05111 366 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 ELNP15502 786 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 PLCD1P51178 756 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 HERVK_113P62684 666 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 CCNA1P78396 465 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
DDX42-204ENST00000577940 U2AF1L4Q8WU68 220 aaKnown RBP10.04□□□□□ -0.8
DDX42-204ENST00000577940 DPF3Q92784 378 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 GPATCH3Q96I76 525 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 HTATIP2Q9BUP3 242 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 LNPKQ9C0E8 428 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 KIAA1683Q9H0B3 1180 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 OTOFQ9HC10 1997 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 ATP8A2Q9NTI2 1148 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
DDX42-204ENST00000577940 TCRBV5S4A2TA0A5A2 114 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 GLRX3O76003 335 aaKnown RBP10.03□□□□□ -0.8
DDX42-204ENST00000577940 HMGCRP04035 888 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 SOCS4Q8WXH5 440 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 C12orf42Q96LP6 360 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 NUDT12Q9BQG2 462 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 UNC93B1Q9H1C4 597 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 CWC22Q9HCG8 908 aaKnown RBP10.03□□□□□ -0.8
DDX42-204ENST00000577940 DCP1AQ9NPI6 582 aaPredicted RBP10.03□□□□□ -0.8
DDX42-204ENST00000577940 RTN4Q9NQC3 1192 aaKnown RBP10.03□□□□□ -0.8
DDX42-204ENST00000577940 RBPJLQ9UBG7 517 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 GJD2Q9UKL4 321 aa10.03□□□□□ -0.8
DDX42-204ENST00000577940 MPHOSPH10O00566 681 aaKnown RBP10.02□□□□□ -0.81
DDX42-204ENST00000577940 XRCC5P13010 732 aaKnown RBP10.02□□□□□ -0.81
DDX42-204ENST00000577940 SHMT1P34896 483 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 ADD2P35612 726 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 GABPAQ06546 454 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 DEFB118Q96PH6 123 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 ARMT1Q9H993 441 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 ECHDC1Q9NTX5 307 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 HOXC10Q9NYD6 342 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 RABGAP1Q9Y3P9 1069 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 NR2E3Q9Y5X4 410 aa10.02□□□□□ -0.81
DDX42-204ENST00000577940 HTTP42858 3142 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 LAMB1P07942 1786 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 RPTORQ8N122 1335 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 SMARCA5O60264 1052 aaPredicted RBP10.01□□□□□ -0.81
DDX42-204ENST00000577940 FARP2O94887 1054 aaPredicted RBP10.01□□□□□ -0.81
DDX42-204ENST00000577940 MBD4O95243 580 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 ERVK-9P63128 1117 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 ERVK-24P63145 666 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 SHROOM1Q2M3G4 852 aaPredicted RBP10.01□□□□□ -0.81
DDX42-204ENST00000577940 LRRFIP1Q32MZ4 808 aaKnown RBP10.01□□□□□ -0.81
DDX42-204ENST00000577940 CATSPERGQ6ZRH7 1159 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 TMEM179Q6ZVK1 233 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 PLEKHH3Q7Z736 793 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 LCORLQ8N3X6 602 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 SDR42E1Q8WUS8 393 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 SHISA4Q96DD7 197 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 CCDC17Q96LX7 622 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 PAGR1Q9BTK6 254 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 SH2D4AQ9H788 454 aa10.01□□□□□ -0.81
DDX42-204ENST00000577940 HMX1Q9NP08 348 aaPredicted RBP10.01□□□□□ -0.81
DDX42-204ENST00000577940 PAK6Q9NQU5 681 aaPredicted RBP10.01□□□□□ -0.81
DDX42-204ENST00000577940 MYH2Q9UKX2 1941 aa10□□□□□ -0.81
DDX42-204ENST00000577940 H0YGN5 161 aa10□□□□□ -0.81
DDX42-204ENST00000577940 VCAM1P19320 739 aa10□□□□□ -0.81
DDX42-204ENST00000577940 CYP2B6P20813 491 aa10□□□□□ -0.81
DDX42-204ENST00000577940 RGS2P41220 211 aa10□□□□□ -0.81
DDX42-204ENST00000577940 ZYXQ15942 572 aaKnown RBP10□□□□□ -0.81
DDX42-204ENST00000577940 Q3C1V9 767 aa10□□□□□ -0.81
DDX42-204ENST00000577940 HABP4Q5JVS0 413 aaKnown RBP10□□□□□ -0.81
DDX42-204ENST00000577940 LBX2Q6XYB7 198 aa10□□□□□ -0.81
DDX42-204ENST00000577940 UBE2Q1Q7Z7E8 422 aa10□□□□□ -0.81
DDX42-204ENST00000577940 ACER1Q8TDN7 264 aa10□□□□□ -0.81
DDX42-204ENST00000577940 EDC3Q96F86 508 aaKnown RBP10□□□□□ -0.81
DDX42-204ENST00000577940 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
DDX42-204ENST00000577940 XRN2Q9H0D6 950 aaKnown RBP eCLIP10□□□□□ -0.81
DDX42-204ENST00000577940 TXNRD2Q9NNW7 524 aa10□□□□□ -0.81
DDX42-204ENST00000577940 PCDH10Q9P2E7 1040 aa10□□□□□ -0.81
DDX42-204ENST00000577940 SLC4A4Q9Y6R1 1079 aa10□□□□□ -0.81
DDX42-204ENST00000577940 KIAA0100Q14667 2235 aaKnown RBP10□□□□□ -0.81
DDX42-204ENST00000577940 ERC2O15083 957 aa9.99□□□□□ -0.81
DDX42-204ENST00000577940 ZKSCAN1P17029 563 aaPredicted RBP9.99□□□□□ -0.81
DDX42-204ENST00000577940 COG2Q14746 738 aa9.99□□□□□ -0.81
DDX42-204ENST00000577940 SEPT2Q15019 361 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms