RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 CNMDO75829 334 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 GDF11O95390 407 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 ADCYAP1R1P41586 468 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 TLE2Q04725 743 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 GRB14Q14449 540 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 USP17L2Q6R6M4 530 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 IL27Q8NEV9 243 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 FERMT2Q96AC1 680 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 EMILIN3Q9NT22 766 aa17.47■□□□□ 0.39
PPP4R1-206ENST00000577779 TRANK1O15050 2925 aa17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 ITGB8P26012 769 aa17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 IL15P40933 162 aaPredicted RBP17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 MRPS5P82675 430 aaKnown RBP17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 TIFAQ96CG3 184 aa17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 TRIM34Q9BYJ4 488 aa17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 DHX36Q9H2U1 1008 aaKnown RBP17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 TACC3Q9Y6A5 838 aa17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 SIPA1L1O43166 1804 aa17.46■□□□□ 0.39
PPP4R1-206ENST00000577779 C1orf53Q5VUE5 145 aa17.45■□□□□ 0.38
PPP4R1-206ENST00000577779 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
PPP4R1-206ENST00000577779 NSUN4Q96CB9 384 aaKnown RBP17.45■□□□□ 0.38
PPP4R1-206ENST00000577779 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L15C9J2P7 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L13C9JLJ4 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L11C9JVI0 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L18D6R9N7 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L22D6RA61 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L17D6RBQ6 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L19D6RCP7 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L20D6RJB6 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 SEPT4O43236 478 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 CLTBP09497 229 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 RAG1P15918 1043 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 TIMM10P62072 90 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 FPGSQ05932 587 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 USP17L24Q0WX57 530 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 SH3RF3Q8TEJ3 882 aaPredicted RBP17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 C1QTNF1Q9BXJ1 281 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 DNAJC18Q9H819 358 aa17.44■□□□□ 0.38
PPP4R1-206ENST00000577779 IGHA2P01877 340 aa17.43■□□□□ 0.38
PPP4R1-206ENST00000577779 LRRC41Q15345 812 aa17.43■□□□□ 0.38
PPP4R1-206ENST00000577779 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
PPP4R1-206ENST00000577779 DPP9Q86TI2 863 aa17.43■□□□□ 0.38
PPP4R1-206ENST00000577779 NOL10Q9BSC4 688 aaKnown RBP17.43■□□□□ 0.38
PPP4R1-206ENST00000577779 RAI14Q9P0K7 980 aa17.43■□□□□ 0.38
PPP4R1-206ENST00000577779 PTPRCP08575 1304 aa17.43■□□□□ 0.38
PPP4R1-206ENST00000577779 KIAA0355O15063 1070 aa17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 OLFML2BQ68BL8 750 aa17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 FOXP4Q8IVH2 680 aaPredicted RBP17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 FEZ1Q99689 392 aa17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 PRDM12Q9H4Q4 367 aa17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 BTBD7Q9P203 1132 aa17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
PPP4R1-206ENST00000577779 PQBP1O60828 265 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 CCDC85BQ15834 202 aaPredicted RBP17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 CATSPERGQ6ZRH7 1159 aa17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 METTL16Q86W50 562 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 MRPL50Q8N5N7 158 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 XAGE2Q96GT9 111 aa17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 C12orf42Q96LP6 360 aa17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 HMG20BQ9P0W2 317 aa17.41■□□□□ 0.38
PPP4R1-206ENST00000577779 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 ADORA2AP29274 412 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 MAPKAPK5Q8IW41 473 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 TMEM39AQ9NV64 488 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 PHF24Q9UPV7 400 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 HCN4Q9Y3Q4 1203 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
PPP4R1-206ENST00000577779 MUC6Q6W4X9 2439 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 GH2P01242 217 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 LBX2Q6XYB7 198 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 PALD1Q9ULE6 856 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 ARIH1Q9Y4X5 557 aaPredicted RBP17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 ZNF236Q9UL36 1845 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 PLXNA1Q9UIW2 1896 aa17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 TCF20Q9UGU0 1960 aaKnown RBP17.39■□□□□ 0.37
PPP4R1-206ENST00000577779 STRNO43815 780 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 BAG3O95817 575 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 PLCG2P16885 1265 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 VCAM1P19320 739 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 IGFBP4P22692 258 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 PBX2P40425 430 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 USP14P54578 494 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 PRAMEF19Q5SWL8 479 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 NECAB3Q96P71 396 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms