RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 SNX21Q969T3 373 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 TRIM47Q96LD4 638 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 UBE2OQ9C0C9 1292 aaKnown RBP11.92□□□□□ -0.5
CRLF3-202ENST00000577725 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 BIN2Q9UBW5 565 aaPredicted RBP11.92□□□□□ -0.5
CRLF3-202ENST00000577725 ZMYND8Q9ULU4 1186 aaPredicted RBP11.92□□□□□ -0.5
CRLF3-202ENST00000577725 GPR75-ASB3A0A0A6YYF3 556 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 MINDY4BA8MYZ0 360 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 ZNF213O14771 459 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 ST18O60284 1047 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 BAG3O95817 575 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 USP5P45974 858 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 CRKP46108 304 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 PPP4CP60510 307 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 FKBP1AP62942 108 aaKnown RBP11.91□□□□□ -0.5
CRLF3-202ENST00000577725 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 BLOC1S2Q6QNY1 142 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 TGFBRAP1Q8WUH2 860 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 TTC14Q96N46 770 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 NACAP1Q9BZK3 213 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 TM6SF1Q9BZW5 370 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 SRRDQ9UH36 339 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
CRLF3-202ENST00000577725 SUGT1Q9Y2Z0 365 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 ARIH1Q9Y4X5 557 aaPredicted RBP11.91□□□□□ -0.5
CRLF3-202ENST00000577725 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 PRUNE2Q8WUY3 3088 aa11.91□□□□□ -0.5
CRLF3-202ENST00000577725 SSC5DA1L4H1 1573 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 TLR2O60603 784 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
CRLF3-202ENST00000577725 RPS6KB1P23443 525 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 PSMA5P28066 241 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 HOXD10P28358 340 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 IREB2P48200 963 aaKnown RBP11.9□□□□□ -0.5
CRLF3-202ENST00000577725 AK2P54819 239 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 RHBDL3P58872 404 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 KRT32Q14532 448 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 ZNF697Q5TEC3 545 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 CHST3Q7LGC8 479 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 ANKRD13AQ8IZ07 590 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 BRI3BPQ8WY22 251 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
CRLF3-202ENST00000577725 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 DEFB129Q9H1M3 183 aa11.9□□□□□ -0.5
CRLF3-202ENST00000577725 DCP1AQ9NPI6 582 aaPredicted RBP11.9□□□□□ -0.5
CRLF3-202ENST00000577725 ZMYM6O95789 1325 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 NEDD4P46934 1319 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 ECM29Q5VYK3 1845 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 CCL15-CCL14A0A0B4J2E2 113 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 USP17L21D6R901 530 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 K7ELQ4 463 aaPredicted RBP11.89□□□□□ -0.51
CRLF3-202ENST00000577725 IGSF3O75054 1194 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 TFRCP02786 760 aaKnown RBP11.89□□□□□ -0.51
CRLF3-202ENST00000577725 MMP14P50281 582 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
CRLF3-202ENST00000577725 PPARAQ07869 468 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 PICALMQ13492 652 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 CCL15Q16663 113 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 CTR9Q6PD62 1173 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 TMED8Q6PL24 325 aaPredicted RBP11.89□□□□□ -0.51
CRLF3-202ENST00000577725 OPTNQ96CV9 577 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 CDX2Q99626 313 aaPredicted RBP11.89□□□□□ -0.51
CRLF3-202ENST00000577725 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 MYH1P12882 1939 aa11.89□□□□□ -0.51
CRLF3-202ENST00000577725 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 LARGE1O95461 756 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 SYN1P17600 705 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 GTF2A2P52657 109 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 CACNB3P54284 484 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 SUPT20HL1Q3ZLR7 823 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
CRLF3-202ENST00000577725 APOBEC3HQ6NTF7 200 aaKnown RBP11.88□□□□□ -0.51
CRLF3-202ENST00000577725 CDC42EP5Q6NZY7 148 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 HHIPL2Q6UWX4 724 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 NECAB2Q7Z6G3 386 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 MB21D2Q8IYB1 491 aaPredicted RBP11.88□□□□□ -0.51
CRLF3-202ENST00000577725 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 PAWRQ96IZ0 340 aaKnown RBP11.88□□□□□ -0.51
CRLF3-202ENST00000577725 UNC93B1Q9H1C4 597 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 DDX4Q9NQI0 724 aaKnown RBP11.88□□□□□ -0.51
CRLF3-202ENST00000577725 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
CRLF3-202ENST00000577725 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 PPP2R3BQ9Y5P8 575 aa11.88□□□□□ -0.51
CRLF3-202ENST00000577725 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
CRLF3-202ENST00000577725 FLT1P17948 1338 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 MYO3BQ8WXR4 1341 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 B4E1Z4 1266 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 OSBPP22059 807 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 PSMC4P43686 418 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms