RNA–Protein interactions for RNA: ENST00000577699.6

AP003028.1-201, humanhuman

TSL 5 BASIC

Gene AP003028.1, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-201ENST00000577699 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP14P54578 494 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 RAB3GAP1Q15042 981 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 ABCB5Q2M3G0 1257 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 HSP90AB4PQ58FF6 505 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 MORN1Q5T089 497 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 GPR142Q7Z601 462 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 PLEKHH3Q7Z736 793 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 C7orf61Q8IZ16 206 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 USP6NLQ92738 828 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 KIAA1683Q9H0B3 1180 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 C11orf49Q9H6J7 331 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 RABGAP1Q9Y3P9 1069 aa13.74□□□□□ -0.21
AP003028.1-201ENST00000577699 VCAM1P19320 739 aa13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 CCNA1P78396 465 aa13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 CERKLQ49MI3 558 aaPredicted RBP13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 STAP2Q9UGK3 403 aa13.73□□□□□ -0.21
AP003028.1-201ENST00000577699 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 FRMPD3Q5JV73 1810 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 MAGEB6P1A0A0J9YX57 407 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 GLRX3O76003 335 aaKnown RBP13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 SHMT1P34896 483 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 CACNB2Q08289 660 aaPredicted RBP13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 Q3C1V9 767 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 PANK1Q8TE04 598 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 CABP5Q9NP86 173 aa13.72□□□□□ -0.21
AP003028.1-201ENST00000577699 CNMDO75829 334 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 PDE6AP16499 860 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 BMP8BP34820 402 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 MAP2K5Q13163 448 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 CCL14Q16627 93 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 SLC9C2Q5TAH2 1124 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 CATSPERGQ6ZRH7 1159 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 RHPN1Q8TCX5 695 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 GDF15Q99988 308 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 IL1RAPL2Q9NP60 686 aa13.71□□□□□ -0.21
AP003028.1-201ENST00000577699 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 PFASO15067 1338 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 ZNF236Q9UL36 1845 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 MS4A1P11836 297 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 COL6A1P12109 1028 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 CCND3P30281 292 aaPredicted RBP13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 PLCD1P51178 756 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 CLASRPQ8N2M8 674 aaKnown RBP13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 RPAP3Q9H6T3 665 aaPredicted RBP13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 MCM9Q9NXL9 1143 aa13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 ZMYND8Q9ULU4 1186 aaPredicted RBP13.7□□□□□ -0.22
AP003028.1-201ENST00000577699 COL6A3P12111 3177 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 MYH8P13535 1937 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 SLC15A5A6NIM6 579 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 GOLIM4O00461 696 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 HMMRO75330 724 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 GUCY1A2P33402 732 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 GABPAQ06546 454 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 WDR78Q5VTH9 848 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 LHX8Q68G74 356 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 MIER1Q8N108 512 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 DNAJC2Q99543 621 aaKnown RBP13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 IVNS1ABPQ9Y6Y0 642 aa13.69□□□□□ -0.22
AP003028.1-201ENST00000577699 ZNF532Q9HCE3 1301 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 TCRBV5S4A2TA0A5A2 114 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 HOXC6P09630 235 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 IFIT2P09913 472 aaKnown RBP13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 SYN1P17600 705 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 PTPREP23469 700 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 GRB14Q14449 540 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 SEPT2Q15019 361 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 RPAP2Q8IXW5 612 aaPredicted RBP13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 EDC3Q96F86 508 aaKnown RBP13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 BTBD7Q9P203 1132 aa13.68□□□□□ -0.22
AP003028.1-201ENST00000577699 APBB1O00213 710 aa13.67□□□□□ -0.22
AP003028.1-201ENST00000577699 MAGEA10P43363 369 aaPredicted RBP13.67□□□□□ -0.22
AP003028.1-201ENST00000577699 TMEM179Q6ZVK1 233 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms