RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-205ENST00000577686 MORN1Q5T089 497 aa17.25■□□□□ 0.35
SMARCD2-205ENST00000577686 AACSQ86V21 672 aa17.25■□□□□ 0.35
SMARCD2-205ENST00000577686 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-205ENST00000577686 FOCADQ5VW36 1801 aa17.25■□□□□ 0.35
SMARCD2-205ENST00000577686 SIPA1L1O43166 1804 aa17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 SLC15A5A6NIM6 579 aa17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 JAG1P78504 1218 aa17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 USP6NLQ92738 828 aa17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 EAF2Q96CJ1 260 aaPredicted RBP17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 UBE2OQ9C0C9 1292 aaKnown RBP17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 PORCNQ9H237 461 aa17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 TLR7Q9NYK1 1049 aaKnown RBP17.24■□□□□ 0.35
SMARCD2-205ENST00000577686 VCAM1P19320 739 aa17.23■□□□□ 0.35
SMARCD2-205ENST00000577686 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMARCD2-205ENST00000577686 LBX2Q6XYB7 198 aa17.23■□□□□ 0.35
SMARCD2-205ENST00000577686 CATSPERGQ6ZRH7 1159 aa17.23■□□□□ 0.35
SMARCD2-205ENST00000577686 TDHQ8IZJ6 230 aa17.23■□□□□ 0.35
SMARCD2-205ENST00000577686 SLC17A8Q8NDX2 589 aa17.23■□□□□ 0.35
SMARCD2-205ENST00000577686 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
SMARCD2-205ENST00000577686 DDX60LQ5H9U9 1706 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 HMMRO75330 724 aa17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 MAGEA10P43363 369 aaPredicted RBP17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 Q3C1V9 767 aa17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 LRIT3Q3SXY7 679 aa17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 CLASRPQ8N2M8 674 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 SH2D4AQ9H788 454 aa17.22■□□□□ 0.35
SMARCD2-205ENST00000577686 MPHOSPH10O00566 681 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 SYN1P17600 705 aa17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 PTPREP23469 700 aa17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 SHROOM1Q2M3G4 852 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 LBHD1Q9BQE6 289 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 RPAP3Q9H6T3 665 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 PRKAG2Q9UGJ0 569 aa17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 EXOC6BQ9Y2D4 811 aa17.21■□□□□ 0.35
SMARCD2-205ENST00000577686 COL6A1P12109 1028 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 CNGA1P29973 690 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 MNX1P50219 401 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 CCL14Q16627 93 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 SLC9C2Q5TAH2 1124 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 KIF1BPQ96EK5 621 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 MCM9Q9NXL9 1143 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 SWAP70Q9UH65 585 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 PFASO15067 1338 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 DOCK3Q8IZD9 2030 aa17.2■□□□□ 0.34
SMARCD2-205ENST00000577686 PLXNB2O15031 1838 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 CDK5RAP2Q96SN8 1893 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 SOX1O00570 391 aaPredicted RBP17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 STRNO43815 780 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 PEX10O60683 326 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 HOXC6P09630 235 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 IFIT2P09913 472 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 SHMT1P34896 483 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 DPP9Q86TI2 863 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 RIOK1Q9BRS2 568 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 ARHGEF10LQ9HCE6 1279 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 MYH1P12882 1939 aa17.19■□□□□ 0.34
SMARCD2-205ENST00000577686 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 PDE6AP16499 860 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 GRB14Q14449 540 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 COG2Q14746 738 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 LHX8Q68G74 356 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 DEFB123Q8N688 67 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 LPAR1Q92633 364 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
SMARCD2-205ENST00000577686 DNM1LO00429 736 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 CNMDO75829 334 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 RLBP1P12271 317 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 PLCD1P51178 756 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 SEPT2Q15019 361 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 ARRDC4Q8NCT1 418 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 SHCBP1Q8NEM2 672 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 ACER1Q8TDN7 264 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 DNAJC2Q99543 621 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
SMARCD2-205ENST00000577686 GABPAQ06546 454 aa17.16■□□□□ 0.34
SMARCD2-205ENST00000577686 LRRC26Q2I0M4 334 aa17.16■□□□□ 0.34
SMARCD2-205ENST00000577686 OLFML2BQ68BL8 750 aa17.16■□□□□ 0.34
SMARCD2-205ENST00000577686 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
SMARCD2-205ENST00000577686 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
SMARCD2-205ENST00000577686 MROH8Q9H579 483 aa17.16■□□□□ 0.34
SMARCD2-205ENST00000577686 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
SMARCD2-205ENST00000577686 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms