RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GRM2Q14416 872 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 SLBPQ14493 270 aaKnown RBP eCLIP5.52□□□□□ -1.53
TOP2A-202ENST00000577541 ZNF827Q17R98 1081 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 MFSD2AQ8NA29 543 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 COX4I2Q96KJ9 171 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 SIRT5Q9NXA8 310 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 OR14I1A6ND48 311 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 N4BP3O15049 544 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 TPP2P29144 1249 aaPredicted RBP5.51□□□□□ -1.53
TOP2A-202ENST00000577541 EPHB3P54753 998 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 NKG7Q16617 165 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 LETMD1Q6P1Q0 360 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 SPPL2CQ8IUH8 684 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 PIWIL2Q8TC59 973 aaKnown RBP5.51□□□□□ -1.53
TOP2A-202ENST00000577541 DHX38Q92620 1227 aaKnown RBP5.51□□□□□ -1.53
TOP2A-202ENST00000577541 SHISA4Q96DD7 197 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 CBX8Q9HC52 389 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 EBF1Q9UH73 591 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 GPR160Q9UJ42 338 aa5.51□□□□□ -1.53
TOP2A-202ENST00000577541 MATN3O15232 486 aa5.5□□□□□ -1.53
TOP2A-202ENST00000577541 MAGEA10P43363 369 aaPredicted RBP5.5□□□□□ -1.53
TOP2A-202ENST00000577541 CNKSR3Q6P9H4 555 aa5.5□□□□□ -1.53
TOP2A-202ENST00000577541 LINC01356Q8N9X3 169 aa5.5□□□□□ -1.53
TOP2A-202ENST00000577541 PPP1R13LQ8WUF5 828 aa5.5□□□□□ -1.53
TOP2A-202ENST00000577541 CCDC74AQ96AQ1 378 aa5.5□□□□□ -1.53
TOP2A-202ENST00000577541 HRKO00198 91 aa5.49□□□□□ -1.53
TOP2A-202ENST00000577541 EFEMP2O95967 443 aa5.49□□□□□ -1.53
TOP2A-202ENST00000577541 FCGRTP55899 365 aa5.49□□□□□ -1.53
TOP2A-202ENST00000577541 SF3B2Q13435 895 aaKnown RBP5.49□□□□□ -1.53
TOP2A-202ENST00000577541 GAB4Q2WGN9 574 aa5.49□□□□□ -1.53
TOP2A-202ENST00000577541 ZFYVE27Q5T4F4 411 aa5.49□□□□□ -1.53
TOP2A-202ENST00000577541 DUSP15Q9H1R2 295 aaPredicted RBP5.49□□□□□ -1.53
TOP2A-202ENST00000577541 ANO2Q9NQ90 1003 aa5.49□□□□□ -1.53
TOP2A-202ENST00000577541 IRS4O14654 1257 aaPredicted RBP5.48□□□□□ -1.53
TOP2A-202ENST00000577541 BMP6P22004 513 aa5.48□□□□□ -1.53
TOP2A-202ENST00000577541 CAP2P40123 477 aa5.48□□□□□ -1.53
TOP2A-202ENST00000577541 FKBP4Q02790 459 aaKnown RBP eCLIP5.48□□□□□ -1.53
TOP2A-202ENST00000577541 EGR3Q06889 387 aa5.48□□□□□ -1.53
TOP2A-202ENST00000577541 RASIP1Q5U651 963 aa5.48□□□□□ -1.53
TOP2A-202ENST00000577541 TMEFF1Q8IYR6 380 aa5.48□□□□□ -1.53
TOP2A-202ENST00000577541 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
TOP2A-202ENST00000577541 SYTL4Q96C24 671 aaPredicted RBP5.48□□□□□ -1.53
TOP2A-202ENST00000577541 CNTD2Q9H8S5 307 aa5.48□□□□□ -1.53
TOP2A-202ENST00000577541 TRIM37O94972 964 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 CHRNEQ04844 493 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 ADGRF1Q5T601 910 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 FAM129CQ86XR2 697 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 TP53I13Q8NBR0 393 aaPredicted RBP5.47□□□□□ -1.53
TOP2A-202ENST00000577541 ELMO3Q96BJ8 720 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 TRIT1Q9H3H1 467 aaKnown RBP5.47□□□□□ -1.53
TOP2A-202ENST00000577541 PPP4R2Q9NY27 417 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 DUSP13Q9UII6 198 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 PCDHA4Q9UN74 947 aa5.47□□□□□ -1.53
TOP2A-202ENST00000577541 XRCC5P13010 732 aaKnown RBP5.46□□□□□ -1.54
TOP2A-202ENST00000577541 SSFA2P28290 1259 aa5.46□□□□□ -1.54
TOP2A-202ENST00000577541 ADAM17P78536 824 aa5.46□□□□□ -1.54
TOP2A-202ENST00000577541 INPP5AQ14642 412 aa5.46□□□□□ -1.54
TOP2A-202ENST00000577541 UBXN11Q5T124 520 aa5.46□□□□□ -1.54
TOP2A-202ENST00000577541 Q96M66 194 aa5.46□□□□□ -1.54
TOP2A-202ENST00000577541 MRIQ9BWK5 157 aa5.46□□□□□ -1.54
TOP2A-202ENST00000577541 NOTOA8MTQ0 251 aa5.45□□□□□ -1.54
TOP2A-202ENST00000577541 KCNC1P48547 511 aa5.45□□□□□ -1.54
TOP2A-202ENST00000577541 CDH24Q86UP0 819 aa5.45□□□□□ -1.54
TOP2A-202ENST00000577541 PWWP2AQ96N64 755 aa5.45□□□□□ -1.54
TOP2A-202ENST00000577541 SLITRK6Q9H5Y7 841 aa5.45□□□□□ -1.54
TOP2A-202ENST00000577541 PRAMEF27A3QJZ7 478 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 PAGE1O75459 146 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 VIPR1P32241 457 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 ZNF211Q13398 564 aaPredicted RBP5.44□□□□□ -1.54
TOP2A-202ENST00000577541 PI16Q6UXB8 463 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 SIRT2Q8IXJ6 389 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 ANKS4BQ8N8V4 417 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 XAGE3Q8WTP9 111 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 MZB1Q8WU39 189 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 SCAND2PQ9GZW5 306 aaPredicted RBP5.44□□□□□ -1.54
TOP2A-202ENST00000577541 GPATCH2Q9NW75 528 aa5.44□□□□□ -1.54
TOP2A-202ENST00000577541 EIF1AYO14602 144 aaKnown RBP5.43□□□□□ -1.54
TOP2A-202ENST00000577541 PTPN11Q06124 597 aaPredicted RBP5.43□□□□□ -1.54
TOP2A-202ENST00000577541 DUSP4Q13115 394 aa5.43□□□□□ -1.54
TOP2A-202ENST00000577541 LRFN4Q6PJG9 635 aa5.43□□□□□ -1.54
TOP2A-202ENST00000577541 HID1Q8IV36 788 aa5.43□□□□□ -1.54
TOP2A-202ENST00000577541 VWCEQ96DN2 955 aa5.43□□□□□ -1.54
TOP2A-202ENST00000577541 WNT10AQ9GZT5 417 aa5.43□□□□□ -1.54
TOP2A-202ENST00000577541 WDR26Q9H7D7 661 aa5.43□□□□□ -1.54
TOP2A-202ENST00000577541 BRPF3Q9ULD4 1205 aa5.43□□□□□ -1.54
TOP2A-202ENST00000577541 CST3P01034 146 aaPredicted RBP5.42□□□□□ -1.54
TOP2A-202ENST00000577541 LTKP29376 864 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 GDF5P43026 501 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 CDR1P51861 262 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 PLCB3Q01970 1234 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 PRAMEF13Q5VWM6 474 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 PHLDB3Q6NSJ2 640 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 TSPYL5Q86VY4 417 aaPredicted RBP5.42□□□□□ -1.54
TOP2A-202ENST00000577541 NECAB3Q96P71 396 aaPredicted RBP5.42□□□□□ -1.54
TOP2A-202ENST00000577541 SMPD4Q9NXE4 827 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 AKAP2Q9Y2D5 859 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 SAMM50Q9Y512 469 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 PCDHA11Q9Y5I1 949 aa5.42□□□□□ -1.54
TOP2A-202ENST00000577541 C1QTNF3-AMACRE9PGA6 284 aa5.41□□□□□ -1.54
TOP2A-202ENST00000577541 SLURP1P55000 103 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms