RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 ZNF654Q8IZM8 581 aa14.54□□□□□ -0.08
TSEN54-204ENST00000577197 FAM177A1Q8N128 213 aaPredicted RBP14.54□□□□□ -0.08
TSEN54-204ENST00000577197 NSUN7Q8NE18 718 aaKnown RBP14.54□□□□□ -0.08
TSEN54-204ENST00000577197 DEFB129Q9H1M3 183 aa14.54□□□□□ -0.08
TSEN54-204ENST00000577197 RBM27Q9P2N5 1060 aaKnown RBP14.54□□□□□ -0.08
TSEN54-204ENST00000577197 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
TSEN54-204ENST00000577197 DDTLA6NHG4 134 aaPredicted RBP14.53□□□□□ -0.08
TSEN54-204ENST00000577197 CPLX1O14810 134 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 POTEJP0CG39 1038 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 IFNAR1P17181 557 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 TCP10Q12799 353 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 TROAPQ12815 778 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 RCSD1Q6JBY9 416 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 SH3BP5LQ7L8J4 393 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 KRT26Q7Z3Y9 468 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 CRACR2BQ8N4Y2 399 aaPredicted RBP14.53□□□□□ -0.08
TSEN54-204ENST00000577197 NKX2-3Q8TAU0 364 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 CSRNP1Q96S65 589 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 TRIM34Q9BYJ4 488 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 IL17RBQ9NRM6 502 aa14.53□□□□□ -0.08
TSEN54-204ENST00000577197 GOLGA8AA7E2F4 631 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 SMIM22K7EJ46 135 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 BRD1O95696 1058 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 TOP1P11387 765 aaKnown RBP14.52□□□□□ -0.09
TSEN54-204ENST00000577197 SMARCA1P28370 1054 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 GJB2P29033 226 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 KIF5BP33176 963 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 GNAQP50148 359 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 NECAB1Q8N987 351 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 FANCBQ8NB91 859 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 KAT14Q9H8E8 782 aa14.52□□□□□ -0.09
TSEN54-204ENST00000577197 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.09
TSEN54-204ENST00000577197 TOMM70O94826 608 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 EVX2Q03828 476 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 NTRK3Q16288 839 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 RTN1Q16799 776 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 FAM47AQ5JRC9 791 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 MAP1SQ66K74 1059 aaPredicted RBP14.51□□□□□ -0.09
TSEN54-204ENST00000577197 TMEM179Q6ZVK1 233 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 USP48Q86UV5 1035 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 ZSCAN29Q8IWY8 852 aaPredicted RBP14.51□□□□□ -0.09
TSEN54-204ENST00000577197 ZFPM1Q8IX07 1006 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 SLC44A5Q8NCS7 719 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 SMC1BQ8NDV3 1235 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 RBM46Q8TBY0 533 aaKnown RBP14.51□□□□□ -0.09
TSEN54-204ENST00000577197 WASF1Q92558 559 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 MKL1Q969V6 931 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 TEPSINQ96N21 525 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 TMEM39BQ9GZU3 492 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 DNAJC18Q9H819 358 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 KANSL2Q9H9L4 492 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 MTMR4Q9NYA4 1195 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 NYAP2Q9P242 653 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 ATP6V1DQ9Y5K8 247 aa14.51□□□□□ -0.09
TSEN54-204ENST00000577197 PTPDC1A2A3K4 754 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 ADM5C9JUS6 153 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 STX6O43752 255 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 CTDNEP1O95476 244 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 TTLL1O95922 423 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 SYT1P21579 422 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 STK3Q13188 491 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 CERKLQ49MI3 558 aaPredicted RBP14.5□□□□□ -0.09
TSEN54-204ENST00000577197 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 SPRYD3Q8NCJ5 442 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 PNMA1Q8ND90 353 aa14.5□□□□□ -0.09
TSEN54-204ENST00000577197 CTCFLQ8NI51 663 aaPredicted RBP14.5□□□□□ -0.09
TSEN54-204ENST00000577197 LARP6Q9BRS8 491 aaKnown RBP14.5□□□□□ -0.09
TSEN54-204ENST00000577197 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.5□□□□□ -0.09
TSEN54-204ENST00000577197 RNF26Q9BY78 433 aaPredicted RBP14.5□□□□□ -0.09
TSEN54-204ENST00000577197 GLIS2Q9BZE0 524 aaPredicted RBP14.5□□□□□ -0.09
TSEN54-204ENST00000577197 FAM217BQ9NTX9 383 aaPredicted RBP14.5□□□□□ -0.09
TSEN54-204ENST00000577197 PTMSP20962 102 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 NF2P35240 595 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 TRIM22Q8IYM9 498 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 FAM184AQ8NB25 1140 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 CDCA5Q96FF9 252 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 CEP95Q96GE4 821 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 ZKSCAN3Q9BRR0 538 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 SENP2Q9HC62 589 aa14.49□□□□□ -0.09
TSEN54-204ENST00000577197 SCAF8Q9UPN6 1271 aaKnown RBP14.49□□□□□ -0.09
TSEN54-204ENST00000577197 FMNL1O95466 1100 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-204ENST00000577197 SNHG28P0DPA3 235 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 CCT2P78371 535 aaKnown RBP14.48□□□□□ -0.09
TSEN54-204ENST00000577197 FSTL1Q12841 308 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 GRM4Q14833 912 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 NBPF12Q5TAG4 269 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-204ENST00000577197 LARP1BQ659C4 914 aaKnown RBP14.48□□□□□ -0.09
TSEN54-204ENST00000577197 DCAF15Q66K64 600 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 STK11IPQ8N1F8 1099 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 GBP4Q96PP9 640 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 TMEM47Q9BQJ4 181 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.48□□□□□ -0.09
TSEN54-204ENST00000577197 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
TSEN54-204ENST00000577197 NAP1L2Q9ULW6 460 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-204ENST00000577197 DEXIO95424 95 aa14.47□□□□□ -0.09
TSEN54-204ENST00000577197 ITGBL1O95965 494 aaPredicted RBP14.47□□□□□ -0.09
TSEN54-204ENST00000577197 ZSCAN22P10073 491 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms