RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 UBTFL1P0CB47 393 aaPredicted RBP6.85□□□□□ -1.31
CTNS-210ENST00000576979 MX1P20591 662 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
CTNS-210ENST00000576979 INPP5BP32019 993 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 SOX11P35716 441 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 ANAPC15P60006 121 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 CAVIN1Q6NZI2 390 aaKnown RBP6.85□□□□□ -1.31
CTNS-210ENST00000576979 GALNT11Q8NCW6 608 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 SHKBP1Q8TBC3 707 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 ADAMTS19Q8TE59 1207 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 UTP4Q969X6 686 aaKnown RBP6.85□□□□□ -1.31
CTNS-210ENST00000576979 SYAP1Q96A49 352 aaPredicted RBP6.85□□□□□ -1.31
CTNS-210ENST00000576979 PPP1R9BQ96SB3 815 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 DBNDD2Q9BQY9 259 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 PPP1R12CQ9BZL4 782 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 VRTNQ9H8Y1 702 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 LMBRD1Q9NUN5 540 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 EXOC6BQ9Y2D4 811 aa6.85□□□□□ -1.31
CTNS-210ENST00000576979 LZTS3O60299 673 aaPredicted RBP6.84□□□□□ -1.31
CTNS-210ENST00000576979 LTKP29376 864 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 NEK4P51957 841 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 TAF7Q15545 349 aaPredicted RBP6.84□□□□□ -1.31
CTNS-210ENST00000576979 ZSCAN23Q3MJ62 389 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 SLC26A8Q96RN1 970 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 ANO2Q9NQ90 1003 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 TBX22Q9Y458 520 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 CRYBG1Q9Y4K1 1723 aa6.84□□□□□ -1.31
CTNS-210ENST00000576979 NWD1Q149M9 1564 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 SALL3Q9BXA9 1300 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 PRPF40AO75400 957 aaKnown RBP6.83□□□□□ -1.32
CTNS-210ENST00000576979 TPM2P07951 284 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 CHMLP26374 656 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 HOXC9P31274 260 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 IDH3AP50213 366 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 HIF1AQ16665 826 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 HS1BP3Q53T59 392 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 HSP90AB4PQ58FF6 505 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 ZSCAN30Q86W11 494 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 ZGPATQ8N5A5 531 aaKnown RBP6.83□□□□□ -1.32
CTNS-210ENST00000576979 INTS4Q96HW7 963 aaKnown RBP6.83□□□□□ -1.32
CTNS-210ENST00000576979 TMX3Q96JJ7 454 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 STAP2Q9UGK3 403 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 TRIM33Q9UPN9 1127 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 USP20Q9Y2K6 914 aa6.83□□□□□ -1.32
CTNS-210ENST00000576979 LRRFIP2Q9Y608 721 aaKnown RBP6.83□□□□□ -1.32
CTNS-210ENST00000576979 PHRF1Q9P1Y6 1649 aaKnown RBP6.83□□□□□ -1.32
CTNS-210ENST00000576979 MED1Q15648 1581 aaPredicted RBP6.82□□□□□ -1.32
CTNS-210ENST00000576979 NRLP54845 237 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 CUL4AQ13619 759 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 LRSAM1Q6UWE0 723 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.82□□□□□ -1.32
CTNS-210ENST00000576979 KIAA1211Q6ZU35 1233 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 ACAD11Q709F0 780 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 CNTROBQ8N137 903 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 THEMISQ8N1K5 641 aaPredicted RBP6.82□□□□□ -1.32
CTNS-210ENST00000576979 NFATC2IPQ8NCF5 419 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 SCG3Q8WXD2 468 aaKnown RBP6.82□□□□□ -1.32
CTNS-210ENST00000576979 COL26A1Q96A83 441 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
CTNS-210ENST00000576979 ALG2Q9H553 416 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 KLK14Q9P0G3 267 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 HDAC5Q9UQL6 1122 aa6.82□□□□□ -1.32
CTNS-210ENST00000576979 AFDNP55196 1824 aaKnown RBP6.82□□□□□ -1.32
CTNS-210ENST00000576979 SIPA1L3O60292 1781 aaPredicted RBP6.82□□□□□ -1.32
CTNS-210ENST00000576979 WDR33Q9C0J8 1336 aaKnown RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 PNMA6EA0A0J9YXQ4 647 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 UNCXA6NJT0 531 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 TMEM88BA6NKF7 163 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 LGR5O75473 907 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 ATG7O95352 703 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 HOXB7P09629 217 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 EPB42P16452 691 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 RASA1P20936 1047 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 LMOD1P29536 600 aaPredicted RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 OS9Q13438 667 aaPredicted RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 RTN1Q16799 776 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 GLIPR1L2Q4G1C9 344 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 TXNDC11Q6PKC3 985 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 NOL8Q76FK4 1167 aaKnown RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 ABTB2Q8N961 1025 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 SSH3Q8TE77 659 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 RUFY2Q8WXA3 655 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 KIF1BPQ96EK5 621 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 LTV1Q96GA3 475 aaPredicted RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 NSUN5Q96P11 429 aaKnown RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 KRTAP17-1Q9BYP8 105 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 CCDC39Q9UFE4 941 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 GNEQ9Y223 722 aaKnown RBP6.81□□□□□ -1.32
CTNS-210ENST00000576979 ADGRL3Q9HAR2 1447 aa6.81□□□□□ -1.32
CTNS-210ENST00000576979 RGPD5Q99666 1765 aa6.8□□□□□ -1.32
CTNS-210ENST00000576979 RBM47A0AV96 593 aaKnown RBP6.8□□□□□ -1.32
CTNS-210ENST00000576979 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
CTNS-210ENST00000576979 M0R2N6 131 aa6.8□□□□□ -1.32
CTNS-210ENST00000576979 SURF6O75683 361 aaKnown RBP6.8□□□□□ -1.32
CTNS-210ENST00000576979 PKP1Q13835 747 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms