RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 SALL3Q9BXA9 1300 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 CYP2D6P10635 497 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 TDO2P48775 406 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 JAG1P78504 1218 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 C16orf86Q6ZW13 317 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
NDE1-211ENST00000576502 KIAA0100Q14667 2235 aaKnown RBP16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
NDE1-211ENST00000576502 CDK8P49336 464 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 SEPT2Q15019 361 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
NDE1-211ENST00000576502 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 CCAR1Q8IX12 1150 aaKnown RBP16.54■□□□□ 0.24
NDE1-211ENST00000576502 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
NDE1-211ENST00000576502 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
NDE1-211ENST00000576502 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
NDE1-211ENST00000576502 CHGBP05060 677 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 HERVK_113P62684 666 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 UBXN2AP68543 259 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 CAP1Q01518 475 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 ICA1Q05084 483 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 ZYXQ15942 572 aaKnown RBP16.53■□□□□ 0.24
NDE1-211ENST00000576502 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 ZNF333Q96JL9 665 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 MKNK2Q9HBH9 465 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 MORF4L1Q9UBU8 362 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 ZSWIM8A7E2V4 1837 aa16.53■□□□□ 0.24
NDE1-211ENST00000576502 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
NDE1-211ENST00000576502 GRK4P32298 578 aa16.52■□□□□ 0.24
NDE1-211ENST00000576502 CCNA1P78396 465 aa16.52■□□□□ 0.24
NDE1-211ENST00000576502 GPRC5AQ8NFJ5 357 aa16.52■□□□□ 0.24
NDE1-211ENST00000576502 LPAR1Q92633 364 aa16.52■□□□□ 0.24
NDE1-211ENST00000576502 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.24
NDE1-211ENST00000576502 NAPBQ9H115 298 aa16.52■□□□□ 0.24
NDE1-211ENST00000576502 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.24
NDE1-211ENST00000576502 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
NDE1-211ENST00000576502 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.24
NDE1-211ENST00000576502 RBBP6Q7Z6E9 1792 aaKnown RBP16.51■□□□□ 0.23
NDE1-211ENST00000576502 CYP2D7A0A087X1C5 515 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 M0R2C6 588 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 AKR1B1P15121 316 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 VCAM1P19320 739 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 NUCB1Q02818 461 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 PRKCZQ05513 592 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 HELLSQ9NRZ9 838 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 ROBO3Q96MS0 1386 aa16.51■□□□□ 0.23
NDE1-211ENST00000576502 CTGFP29279 349 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 MAPK4P31152 587 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 GUCY1A2P33402 732 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 PDE4BQ07343 736 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 IRF5Q13568 498 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 CATSPERGQ6ZRH7 1159 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 ZNF444Q8N0Y2 327 aaPredicted RBP16.5■□□□□ 0.23
NDE1-211ENST00000576502 RABGAP1Q9Y3P9 1069 aa16.5■□□□□ 0.23
NDE1-211ENST00000576502 FLT3LGP49771 235 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 MFAP1P55081 439 aaKnown RBP16.49■□□□□ 0.23
NDE1-211ENST00000576502 ERVK-9P63128 1117 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 ERVK-24P63145 666 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 DOCK3Q8IZD9 2030 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 PXYLP1Q8TE99 480 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 SH3TC2Q8TF17 1288 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 PAGR1Q9BTK6 254 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 RPAP3Q9H6T3 665 aaPredicted RBP16.49■□□□□ 0.23
NDE1-211ENST00000576502 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
NDE1-211ENST00000576502 ADCY3O60266 1144 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 IGHDP01880 384 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 ATP2B2Q01814 1243 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 EVX2Q03828 476 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 LBX2Q6XYB7 198 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 OSBPL3Q9H4L5 887 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
NDE1-211ENST00000576502 HIP1O00291 1037 aa16.47■□□□□ 0.23
NDE1-211ENST00000576502 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms