RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 PFDN2Q9UHV9 154 aa9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 PCOLCE2Q9UKZ9 415 aa9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 ESYT3A0FGR9 886 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 SUSD5O60279 629 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 UBOX5O94941 541 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 PRAMEF13Q5VWM6 474 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 PODNQ7Z5L7 613 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 TMEM192Q8IY95 271 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 SLC6A18Q96N87 628 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 DPH2Q9BQC3 489 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 CEP41Q9BYV8 373 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 AKTIPQ9H8T0 292 aa9.07□□□□□ -0.96
TOM1L1-222ENST00000575909 IQCA1LA6NCM1 817 aa9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 DIAPH1O60610 1272 aaKnown RBP9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 LRIG2O94898 1065 aa9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 NAT2P11245 290 aa9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 ZNF143P52747 638 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 RNF187Q5TA31 235 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 UBE3DQ7Z6J8 389 aa9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 ANKRD13AQ8IZ07 590 aa9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 AGGF1Q8N302 714 aaeCLIP9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 MFSD2AQ8NA29 543 aa9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 SMARCC1Q92922 1105 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 LENG1Q96BZ8 264 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 SLKQ9H2G2 1235 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 TMX1Q9H3N1 280 aa9.06□□□□□ -0.96
TOM1L1-222ENST00000575909 CLEC3AO75596 197 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 SPATA31C1P0DKV0 1188 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 SQSTM1Q13501 440 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 GRIK4Q16099 956 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 SLC10A6Q3KNW5 377 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 SHISA2Q6UWI4 295 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 LRRC47Q8N1G4 583 aaKnown RBP9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 BEND7Q8N7W2 519 aaPredicted RBP9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 BAHD1Q8TBE0 780 aaPredicted RBP9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 SPATA9Q9BWV2 254 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 LEMD3Q9Y2U8 911 aa9.05□□□□□ -0.96
TOM1L1-222ENST00000575909 SART1O43290 800 aaKnown RBP9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 USP11P51784 963 aa9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 Q6ZS46 218 aa9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 C16orf86Q6ZW13 317 aa9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 ARMCX6Q7L4S7 300 aa9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 SYNPOQ8N3V7 929 aa9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 ACSS3Q9H6R3 686 aa9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 USP21Q9UK80 565 aa9.04□□□□□ -0.96
TOM1L1-222ENST00000575909 PREPP48147 710 aa9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 NRG1Q02297 640 aaPredicted RBP9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 ZC3H12BQ5HYM0 836 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 KIAA0907Q7Z7F0 614 aaPredicted RBP9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 SGSM3Q96HU1 749 aa9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 NACC1Q96RE7 527 aa9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 YIPF2Q9BWQ6 316 aa9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 PTCH2Q9Y6C5 1203 aa9.03□□□□□ -0.96
TOM1L1-222ENST00000575909 ANKRD34BA5PLL1 514 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 AGRPO00253 132 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 GAS2O43903 313 aaKnown RBP9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 ALX3O95076 343 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 PPFIBP1Q86W92 1011 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 ZSWIM2Q8NEG5 633 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 HAUS7Q99871 368 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 CEP131Q9UPN4 1083 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 PRKAB1Q9Y478 270 aa9.02□□□□□ -0.97
TOM1L1-222ENST00000575909 C9orf172C9J069 976 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 WIPF1O43516 503 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 TP53P04637 393 aaPredicted RBP9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 GLB1P16278 677 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 TDRD10Q5VZ19 366 aaKnown RBP9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 HEATR6Q6AI08 1181 aaKnown RBP9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 ZBTB38Q8NAP3 1195 aaPredicted RBP9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 XAGE3Q8WTP9 111 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 PPP1R13LQ8WUF5 828 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 SLC26A8Q96RN1 970 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 FEZ1Q99689 392 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 APBA2Q99767 749 aa9.01□□□□□ -0.97
TOM1L1-222ENST00000575909 C9IYK1 514 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 PPP1R12AO14974 1030 aaPredicted RBP9□□□□□ -0.97
TOM1L1-222ENST00000575909 APBA3O96018 575 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 FAM153BP0C7A2 387 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 RAB6AP20340 208 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 TCEA2Q15560 299 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 UVSSAQ2YD98 709 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 SV2CQ496J9 727 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 ANKRD39Q53RE8 183 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 TMEM67Q5HYA8 995 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 AXDND1Q5T1B0 1012 aaPredicted RBP9□□□□□ -0.97
TOM1L1-222ENST00000575909 CCDC144CPQ8IYA2 1237 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 FAM46AQ96IP4 442 aaKnown RBP9□□□□□ -0.97
TOM1L1-222ENST00000575909 SEMA6CQ9H3T2 930 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 FAM86C1Q9NVL1 165 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 SUSD2Q9UGT4 822 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 DAGLAQ9Y4D2 1042 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 CNTNAP5Q8WYK1 1306 aa9□□□□□ -0.97
TOM1L1-222ENST00000575909 CCDC163A0A0D9SF12 145 aa8.99□□□□□ -0.97
TOM1L1-222ENST00000575909 ADCY3O60266 1144 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms