RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 CCNA1P78396 465 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
TVP23B-208ENST00000575261 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
TVP23B-208ENST00000575261 PLEKHH3Q7Z736 793 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 C7orf61Q8IZ16 206 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 APBA2Q99767 749 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 RIOK1Q9BRS2 568 aaKnown RBP12.69□□□□□ -0.38
TVP23B-208ENST00000575261 KIAA1683Q9H0B3 1180 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 C11orf49Q9H6J7 331 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 CABP5Q9NP86 173 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 RABGAP1Q9Y3P9 1069 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 LAMA2P24043 3122 aaKnown RBP12.69□□□□□ -0.38
TVP23B-208ENST00000575261 ZBED9Q6R2W3 1325 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 MAGEB6P1A0A0J9YX57 407 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 VCAM1P19320 739 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 Q3C1V9 767 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 MORN1Q5T089 497 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 PANK1Q8TE04 598 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 USP6NLQ92738 828 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
TVP23B-208ENST00000575261 GLRX3O76003 335 aaKnown RBP12.67□□□□□ -0.38
TVP23B-208ENST00000575261 POLR3DP05423 398 aaPredicted RBP12.67□□□□□ -0.38
TVP23B-208ENST00000575261 MS4A1P11836 297 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 SHMT1P34896 483 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
TVP23B-208ENST00000575261 PLCD1P51178 756 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
TVP23B-208ENST00000575261 LBX2Q6XYB7 198 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 CATSPERGQ6ZRH7 1159 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 CLASRPQ8N2M8 674 aaKnown RBP12.67□□□□□ -0.38
TVP23B-208ENST00000575261 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
TVP23B-208ENST00000575261 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 A0A0C4DFX4 3053 aa12.67□□□□□ -0.38
TVP23B-208ENST00000575261 PFASO15067 1338 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 CNMDO75829 334 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 PDE6AP16499 860 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 GABPAQ06546 454 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 CCL14Q16627 93 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 SLC9C2Q5TAH2 1124 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 WDR78Q5VTH9 848 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.66□□□□□ -0.38
TVP23B-208ENST00000575261 GDF15Q99988 308 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 RPAP3Q9H6T3 665 aaPredicted RBP12.66□□□□□ -0.38
TVP23B-208ENST00000575261 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
TVP23B-208ENST00000575261 IVNS1ABPQ9Y6Y0 642 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 ZNF236Q9UL36 1845 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 MYH8P13535 1937 aa12.66□□□□□ -0.38
TVP23B-208ENST00000575261 A0A0G2JMZ2 1700 aa12.65□□□□□ -0.38
TVP23B-208ENST00000575261 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
TVP23B-208ENST00000575261 HMMRO75330 724 aa12.65□□□□□ -0.38
TVP23B-208ENST00000575261 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
TVP23B-208ENST00000575261 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
TVP23B-208ENST00000575261 BMP8BP34820 402 aa12.65□□□□□ -0.38
TVP23B-208ENST00000575261 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
TVP23B-208ENST00000575261 EDC3Q96F86 508 aaKnown RBP12.65□□□□□ -0.38
TVP23B-208ENST00000575261 DNAJC2Q99543 621 aaKnown RBP12.65□□□□□ -0.38
TVP23B-208ENST00000575261 MCM9Q9NXL9 1143 aa12.65□□□□□ -0.38
TVP23B-208ENST00000575261 ZNF532Q9HCE3 1301 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 SLC15A5A6NIM6 579 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 APBB1O00213 710 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 GOLIM4O00461 696 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 MPHOSPH10O00566 681 aaKnown RBP12.64□□□□□ -0.39
TVP23B-208ENST00000575261 SOX1O00570 391 aaPredicted RBP12.64□□□□□ -0.39
TVP23B-208ENST00000575261 COL6A1P12109 1028 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 PTPREP23469 700 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 GRB14Q14449 540 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 SEPT2Q15019 361 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 LHX8Q68G74 356 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 RPAP2Q8IXW5 612 aaPredicted RBP12.64□□□□□ -0.39
TVP23B-208ENST00000575261 MIER1Q8N108 512 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
TVP23B-208ENST00000575261 BTBD7Q9P203 1132 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
TVP23B-208ENST00000575261 TCRBV5S4A2TA0A5A2 114 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 MSCO60682 206 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 HOXC6P09630 235 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 SYN1P17600 705 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 MAGEA10P43363 369 aaPredicted RBP12.63□□□□□ -0.39
TVP23B-208ENST00000575261 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 LCORLQ8N3X6 602 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 SWAP70Q9UH65 585 aa12.63□□□□□ -0.39
TVP23B-208ENST00000575261 MYH7P12883 1935 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms