RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 CCDC158Q5M9N0 1113 aa25.37■■□□□ 1.65
SPNS3-203ENST00000575185 EDC3Q96F86 508 aaKnown RBP25.37■■□□□ 1.65
SPNS3-203ENST00000575185 C12orf42Q96LP6 360 aa25.37■■□□□ 1.65
SPNS3-203ENST00000575185 GUCD1Q96NT3 240 aa25.37■■□□□ 1.65
SPNS3-203ENST00000575185 RABGAP1Q9Y3P9 1069 aa25.37■■□□□ 1.65
SPNS3-203ENST00000575185 RLFQ13129 1914 aa25.37■■□□□ 1.65
SPNS3-203ENST00000575185 SPTBN5Q9NRC6 3674 aaKnown RBP25.36■■□□□ 1.65
SPNS3-203ENST00000575185 ATN1P54259 1190 aaPredicted RBP25.36■■□□□ 1.65
SPNS3-203ENST00000575185 MIGA1Q8NAN2 632 aa25.36■■□□□ 1.65
SPNS3-203ENST00000575185 FRAT1Q92837 279 aaPredicted RBP25.36■■□□□ 1.65
SPNS3-203ENST00000575185 FAM161BQ96MY7 647 aa25.36■■□□□ 1.65
SPNS3-203ENST00000575185 GPR108Q9NPR9 543 aa25.36■■□□□ 1.65
SPNS3-203ENST00000575185 TLR7Q9NYK1 1049 aaKnown RBP25.36■■□□□ 1.65
SPNS3-203ENST00000575185 NAV1Q8NEY1 1877 aa25.36■■□□□ 1.65
SPNS3-203ENST00000575185 PRUNE2Q8WUY3 3088 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L15C9J2P7 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L13C9JLJ4 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L11C9JVI0 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L18D6R9N7 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L22D6RA61 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L17D6RBQ6 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L19D6RCP7 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L20D6RJB6 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 CYP7A1P22680 504 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 USP17L24Q0WX57 530 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 TATDN1Q6P1N9 297 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 ACER1Q8TDN7 264 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 COL25A1Q9BXS0 654 aaPredicted RBP25.35■■□□□ 1.65
SPNS3-203ENST00000575185 BTBD7Q9P203 1132 aa25.35■■□□□ 1.65
SPNS3-203ENST00000575185 DDX20Q9UHI6 824 aaKnown RBP25.35■■□□□ 1.65
SPNS3-203ENST00000575185 BCAR3O75815 825 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 VCAM1P19320 739 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 PTPREP23469 700 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 CNGA1P29973 690 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 OS9Q13438 667 aaPredicted RBP25.34■■□□□ 1.65
SPNS3-203ENST00000575185 POLA2Q14181 598 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 RAB3GAP1Q15042 981 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 MFSD14CQ5VZR4 134 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 ATF7IPQ6VMQ6 1270 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 NPLOC4Q8TAT6 608 aa25.34■■□□□ 1.65
SPNS3-203ENST00000575185 DBNLQ9UJU6 430 aaKnown RBP25.34■■□□□ 1.65
SPNS3-203ENST00000575185 ZNF236Q9UL36 1845 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 A0A0G2JMZ2 1700 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 SLC15A5A6NIM6 579 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 POTEB2H3BUK9 544 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 CYP2C19P33261 490 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 CCNA1P78396 465 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 CATSPERGQ6ZRH7 1159 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 TRPV1Q8NER1 839 aa25.33■■□□□ 1.65
SPNS3-203ENST00000575185 ZBED9Q6R2W3 1325 aa25.33■■□□□ 1.64
SPNS3-203ENST00000575185 IDH1O75874 414 aaKnown RBP25.32■■□□□ 1.64
SPNS3-203ENST00000575185 GLRX3O76003 335 aaKnown RBP25.32■■□□□ 1.64
SPNS3-203ENST00000575185 USP5P45974 858 aa25.32■■□□□ 1.64
SPNS3-203ENST00000575185 GRB14Q14449 540 aa25.32■■□□□ 1.64
SPNS3-203ENST00000575185 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.32■■□□□ 1.64
SPNS3-203ENST00000575185 ZNF512BQ96KM6 892 aaPredicted RBP25.32■■□□□ 1.64
SPNS3-203ENST00000575185 LBHD1Q9BQE6 289 aaPredicted RBP25.32■■□□□ 1.64
SPNS3-203ENST00000575185 C1orf115Q9H7X2 142 aa25.32■■□□□ 1.64
SPNS3-203ENST00000575185 TMEM57Q8N5G2 664 aa25.31■■□□□ 1.64
SPNS3-203ENST00000575185 KIAA1683Q9H0B3 1180 aa25.31■■□□□ 1.64
SPNS3-203ENST00000575185 SERPINB13Q9UIV8 391 aa25.31■■□□□ 1.64
SPNS3-203ENST00000575185 SPDYE16A6NNV3 312 aaPredicted RBP25.3■■□□□ 1.64
SPNS3-203ENST00000575185 IPO8O15397 1037 aaKnown RBP25.3■■□□□ 1.64
SPNS3-203ENST00000575185 SURF6O75683 361 aaKnown RBP25.3■■□□□ 1.64
SPNS3-203ENST00000575185 RTP1P59025 263 aa25.3■■□□□ 1.64
SPNS3-203ENST00000575185 ATP2B2Q01814 1243 aa25.3■■□□□ 1.64
SPNS3-203ENST00000575185 MAGEB6Q8N7X4 407 aa25.3■■□□□ 1.64
SPNS3-203ENST00000575185 SSH3Q8TE77 659 aa25.3■■□□□ 1.64
SPNS3-203ENST00000575185 LPAR1Q92633 364 aa25.3■■□□□ 1.64
SPNS3-203ENST00000575185 CCDC8Q9H0W5 538 aaPredicted RBP25.3■■□□□ 1.64
SPNS3-203ENST00000575185 RPAP3Q9H6T3 665 aaPredicted RBP25.3■■□□□ 1.64
SPNS3-203ENST00000575185 DNM1LO00429 736 aa25.29■■□□□ 1.64
SPNS3-203ENST00000575185 HOXC6P09630 235 aa25.29■■□□□ 1.64
SPNS3-203ENST00000575185 USP14P54578 494 aa25.29■■□□□ 1.64
SPNS3-203ENST00000575185 ABCB5Q2M3G0 1257 aa25.29■■□□□ 1.64
SPNS3-203ENST00000575185 CERKLQ49MI3 558 aaPredicted RBP25.29■■□□□ 1.64
SPNS3-203ENST00000575185 FAM109BQ6ICB4 259 aaPredicted RBP25.29■■□□□ 1.64
SPNS3-203ENST00000575185 LBX2Q6XYB7 198 aa25.29■■□□□ 1.64
SPNS3-203ENST00000575185 EHD4Q9H223 541 aa25.29■■□□□ 1.64
SPNS3-203ENST00000575185 IVNS1ABPQ9Y6Y0 642 aa25.29■■□□□ 1.64
SPNS3-203ENST00000575185 CYBAP13498 195 aa25.28■■□□□ 1.64
SPNS3-203ENST00000575185 GUCY1A2P33402 732 aa25.28■■□□□ 1.64
SPNS3-203ENST00000575185 SHMT1P34896 483 aa25.28■■□□□ 1.64
SPNS3-203ENST00000575185 EVX2Q03828 476 aa25.28■■□□□ 1.64
SPNS3-203ENST00000575185 GJC2Q5T442 439 aaPredicted RBP25.28■■□□□ 1.64
SPNS3-203ENST00000575185 ANO1Q5XXA6 986 aa25.28■■□□□ 1.64
SPNS3-203ENST00000575185 ANTXR1Q9H6X2 564 aa25.28■■□□□ 1.64
SPNS3-203ENST00000575185 MSCO60682 206 aa25.27■■□□□ 1.64
SPNS3-203ENST00000575185 IGHA2P01877 340 aa25.27■■□□□ 1.64
SPNS3-203ENST00000575185 PLCD1P51178 756 aa25.27■■□□□ 1.64
SPNS3-203ENST00000575185 EAF2Q96CJ1 260 aaPredicted RBP25.27■■□□□ 1.64
SPNS3-203ENST00000575185 ATP11BQ9Y2G3 1177 aa25.27■■□□□ 1.64
SPNS3-203ENST00000575185 MYH8P13535 1937 aa25.27■■□□□ 1.64
SPNS3-203ENST00000575185 PARP14Q460N5 1801 aa25.26■■□□□ 1.63
SPNS3-203ENST00000575185 ATP8B2P98198 1209 aa25.26■■□□□ 1.63
SPNS3-203ENST00000575185 IGSF3O75054 1194 aa25.25■■□□□ 1.63
SPNS3-203ENST00000575185 SEPT2Q15019 361 aa25.25■■□□□ 1.63
SPNS3-203ENST00000575185 ZNF697Q5TEC3 545 aa25.25■■□□□ 1.63
SPNS3-203ENST00000575185 PRKAG2Q9UGJ0 569 aa25.25■■□□□ 1.63
SPNS3-203ENST00000575185 ADORA2AP29274 412 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms