RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 BIRC2Q13490 618 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 ZBTB37Q5TC79 503 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 SPTY2D1Q68D10 685 aaPredicted RBP6.55□□□□□ -1.36
TSR1-203ENST00000575049 SEZ6L2Q6UXD5 910 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 CYFIP1Q7L576 1253 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 CCDC84Q86UT8 332 aaPredicted RBP6.55□□□□□ -1.36
TSR1-203ENST00000575049 JARID2Q92833 1246 aaPredicted RBP6.55□□□□□ -1.36
TSR1-203ENST00000575049 TBC1D32Q96NH3 1257 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 DEPDC7Q96QD5 511 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 PCGF6Q9BYE7 350 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 LGR6Q9HBX8 967 aa6.55□□□□□ -1.36
TSR1-203ENST00000575049 ADMP35318 185 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 RPL6Q02878 288 aaKnown RBP6.54□□□□□ -1.36
TSR1-203ENST00000575049 FAM160A1Q05DH4 1040 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 RAB33AQ14088 237 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 RASA3Q14644 834 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 ARSHQ5FYA8 562 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 SNAP47Q5SQN1 464 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 ODR4Q5SWX8 454 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 BNC2Q6ZN30 1099 aaPredicted RBP6.54□□□□□ -1.36
TSR1-203ENST00000575049 TSHZ1Q6ZSZ6 1077 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 LRP10Q7Z4F1 713 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 FBXL6Q8N531 539 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 SHKBP1Q8TBC3 707 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 SH3TC2Q8TF17 1288 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 GATA6Q92908 595 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 C8orf48Q96LL4 319 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 RPS6KC1Q96S38 1066 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
TSR1-203ENST00000575049 C1GALT1Q9NS00 363 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 PCOLCE2Q9UKZ9 415 aa6.54□□□□□ -1.36
TSR1-203ENST00000575049 GFRA2O00451 464 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 F13A1P00488 732 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 F13BP05160 661 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 GARTP22102 1010 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 MASP1P48740 699 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 DIEXFQ68CQ4 756 aaKnown RBP6.53□□□□□ -1.36
TSR1-203ENST00000575049 KIAA0907Q7Z7F0 614 aaPredicted RBP6.53□□□□□ -1.36
TSR1-203ENST00000575049 ZAR1Q86SH2 424 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 FERMT3Q86UX7 667 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 ZDHHC13Q8IUH4 622 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.53□□□□□ -1.361e-67■■■□□ 15.5
TSR1-203ENST00000575049 SHISA5Q8N114 240 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 LILRB2Q8N423 598 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 GATAD2BQ8WXI9 593 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 APPBP2Q92624 585 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 SGSM3Q96HU1 749 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 CCDC136Q96JN2 1154 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 TRIM55Q9BYV6 548 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 TERF2IPQ9NYB0 399 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 THRAP3Q9Y2W1 955 aaKnown RBP6.53□□□□□ -1.36
TSR1-203ENST00000575049 MRVI1Q9Y6F6 885 aa6.53□□□□□ -1.36
TSR1-203ENST00000575049 FAM221AA4D161 298 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 CILPO75339 1184 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 EIF4A3P38919 411 aaKnown RBP6.52□□□□□ -1.37
TSR1-203ENST00000575049 NASPP49321 788 aaPredicted RBP6.52□□□□□ -1.37
TSR1-203ENST00000575049 UBE3DQ7Z6J8 389 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 PRPF38AQ8NAV1 312 aaKnown RBP6.52□□□□□ -1.37
TSR1-203ENST00000575049 GOLM1Q8NBJ4 401 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 KCT2Q8NC54 265 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 GIMAP7Q8NHV1 300 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 ZNF507Q8TCN5 953 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 KCNQ5Q9NR82 932 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 TACC3Q9Y6A5 838 aa6.52□□□□□ -1.37
TSR1-203ENST00000575049 ZCCHC6Q5VYS8 1495 aaKnown RBP6.52□□□□□ -1.37
TSR1-203ENST00000575049 ESYT3A0FGR9 886 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 FAM170BA6NMN3 283 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 HMGB1P1B2RPK0 211 aaPredicted RBP6.51□□□□□ -1.37
TSR1-203ENST00000575049 BPNT1O95861 308 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 GRK4P32298 578 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 ETF1P62495 437 aaKnown RBP6.51□□□□□ -1.37
TSR1-203ENST00000575049 CDK5R2Q13319 367 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 ZMYM1Q5SVZ6 1142 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 FBXL19Q6PCT2 694 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 CDC37L1Q7L3B6 337 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 HNRNPLLQ8WVV9 542 aaKnown RBP6.51□□□□□ -1.37
TSR1-203ENST00000575049 SPON2Q9BUD6 331 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 ATG3Q9NT62 314 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 RNF112Q9ULX5 631 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 EID1Q9Y6B2 187 aa6.51□□□□□ -1.37
TSR1-203ENST00000575049 PRR19A6NJB7 356 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 TGFB1P01137 390 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 PAX3P23760 479 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 MAP9Q49MG5 647 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 C4orf46Q504U0 113 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 FAM196AQ6ZSG2 479 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 HOMER1Q86YM7 354 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 ZNF296Q8WUU4 475 aaPredicted RBP6.5□□□□□ -1.37
TSR1-203ENST00000575049 PSMG3-AS1Q96PY0 264 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 CEP89Q96ST8 783 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 DNAJC7Q99615 494 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 METTL22Q9BUU2 404 aaPredicted RBP6.5□□□□□ -1.37
TSR1-203ENST00000575049 OSBPL1AQ9BXW6 950 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 FBRSQ9HAH7 460 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 ADAMTS1Q9UHI8 967 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 EFR3BQ9Y2G0 817 aa6.5□□□□□ -1.37
TSR1-203ENST00000575049 SUPT16HQ9Y5B9 1047 aaKnown RBP6.5□□□□□ -1.37
TSR1-203ENST00000575049 GREM1O60565 184 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms