RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 GOLGA6L6A8MZA4 724 aa27.22■■□□□ 1.95
NPLOC4-217ENST00000574897 WNT7AO00755 349 aa27.22■■□□□ 1.95
NPLOC4-217ENST00000574897 CTCFLQ8NI51 663 aaPredicted RBP27.22■■□□□ 1.95
NPLOC4-217ENST00000574897 KCNH3Q9ULD8 1083 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 USP17L3A6NCW0 530 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 USP17L4A6NCW7 530 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 IL1R1P14778 569 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 BTDP43251 543 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 GSTO1P78417 241 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 LRMPQ12912 555 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 CCDC144BQ3MJ40 725 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 USP17L1Q7RTZ2 530 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 TIGD1Q96MW7 591 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 CLIP2Q9UDT6 1046 aa27.21■■□□□ 1.95
NPLOC4-217ENST00000574897 MYH1P12882 1939 aa27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 C6orf229H3BNL8 230 aa27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 FOXN1O15353 648 aa27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 BAG3O95817 575 aa27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 NOLC1Q14978 699 aaKnown RBP eCLIP27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 ZRSR1Q15695 479 aaKnown RBP27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 NPY5RQ15761 445 aa27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 ZNF827Q17R98 1081 aa27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 TMED8Q6PL24 325 aaPredicted RBP27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 OLFM4Q6UX06 510 aa27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 METTL16Q86W50 562 aaKnown RBP27.2■■□□□ 1.95
NPLOC4-217ENST00000574897 LRRC37AA6NMS7 1700 aa27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 ADAMTS3O15072 1205 aa27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 PTPREP23469 700 aa27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 HOXA10P31260 410 aaPredicted RBP27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 KRT2P35908 639 aa27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 NLRP12P59046 1061 aa27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 PPP4CP60510 307 aa27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 SARM1Q6SZW1 724 aa27.2■■□□□ 1.94
NPLOC4-217ENST00000574897 BBOX1O75936 387 aa27.19■■□□□ 1.94
NPLOC4-217ENST00000574897 XBP1P17861 261 aa27.19■■□□□ 1.94
NPLOC4-217ENST00000574897 MFSD14BQ5SR56 506 aa27.19■■□□□ 1.94
NPLOC4-217ENST00000574897 NOL10Q9BSC4 688 aaKnown RBP27.19■■□□□ 1.94
NPLOC4-217ENST00000574897 NAT10Q9H0A0 1025 aaKnown RBP27.19■■□□□ 1.94
NPLOC4-217ENST00000574897 USP49Q70CQ1 688 aa27.18■■□□□ 1.94
NPLOC4-217ENST00000574897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.18■■□□□ 1.94
NPLOC4-217ENST00000574897 MKNK2Q9HBH9 465 aa27.18■■□□□ 1.94
NPLOC4-217ENST00000574897 DDX60LQ5H9U9 1706 aaKnown RBP27.18■■□□□ 1.94
NPLOC4-217ENST00000574897 KRBA2Q6ZNG9 492 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 FOXP4Q8IVH2 680 aaPredicted RBP27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 MTMR7Q9Y216 660 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 ROBO3Q96MS0 1386 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 RIMBP2O15034 1052 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 RBM6P78332 1123 aaKnown RBP27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 STAG2Q8N3U4 1231 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 KIAA1524Q8TCG1 905 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 KAT14Q9H8E8 782 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 PODXL2Q9NZ53 605 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 TUBE1Q9UJT0 475 aa27.17■■□□□ 1.94
NPLOC4-217ENST00000574897 LDHCP07864 332 aa27.16■■□□□ 1.94
NPLOC4-217ENST00000574897 CNNM3Q8NE01 707 aa27.16■■□□□ 1.94
NPLOC4-217ENST00000574897 CRAMP1Q96RY5 1269 aa27.16■■□□□ 1.94
NPLOC4-217ENST00000574897 TPM3P06753 285 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 PNMA1Q8ND90 353 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 TNFRSF25Q93038 417 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 KLRG2A4D1S0 409 aaPredicted RBP27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 PPEF1O14829 653 aaPredicted RBP27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 ARID5BQ14865 1188 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 RASGRP2Q7LDG7 609 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 TEX11Q8IYF3 940 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 PDILTQ8N807 584 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 CSRNP2Q9H175 543 aa27.15■■□□□ 1.94
NPLOC4-217ENST00000574897 GPR75-ASB3A0A0A6YYF3 556 aa27.14■■□□□ 1.94
NPLOC4-217ENST00000574897 POLR2DO15514 142 aaKnown RBP27.14■■□□□ 1.94
NPLOC4-217ENST00000574897 COL23A1Q86Y22 540 aaPredicted RBP27.14■■□□□ 1.94
NPLOC4-217ENST00000574897 SRPRBQ9Y5M8 271 aaKnown RBP27.14■■□□□ 1.94
NPLOC4-217ENST00000574897 TSPY3P0CV98 308 aa27.14■■□□□ 1.93
NPLOC4-217ENST00000574897 TSPY8P0CW00 308 aa27.14■■□□□ 1.93
NPLOC4-217ENST00000574897 SCG2P13521 617 aa27.14■■□□□ 1.93
NPLOC4-217ENST00000574897 CDC25BP30305 580 aa27.14■■□□□ 1.93
NPLOC4-217ENST00000574897 MRFAP1L1Q96HT8 127 aa27.14■■□□□ 1.93
NPLOC4-217ENST00000574897 GOLGB1Q14789 3259 aaKnown RBP27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 TRIM75PA6NK02 468 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 RASA1P20936 1047 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 GTF2IP78347 998 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 NCAPHQ15003 741 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 CACTINQ8WUQ7 758 aaKnown RBP27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 BPIFA3Q9BQP9 254 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 SERTAD1Q9UHV2 236 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 PCDHA5Q9Y5H7 936 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 RHBDL3P58872 404 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 GRAMD1CQ8IYS0 662 aa27.13■■□□□ 1.93
NPLOC4-217ENST00000574897 FOCADQ5VW36 1801 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 PRR29P0C7W0 189 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 ZNF174Q15697 407 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 SLC35G1Q2M3R5 365 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 DNTTIP2Q5QJE6 756 aaKnown RBP27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 DGKHQ86XP1 1220 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 AMOTL1Q8IY63 956 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 ZNF444Q8N0Y2 327 aaPredicted RBP27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 GPKOWQ92917 476 aaPredicted RBP eCLIP27.12■■□□□ 1.937e-6■□□□□ 8.1
NPLOC4-217ENST00000574897 SPTLC3Q9NUV7 552 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 FLT1P17948 1338 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 COL11A2P13942 1736 aaPredicted RBP27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 PFKFB3Q16875 520 aaPredicted RBP27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 FAM13BQ9NYF5 915 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms