RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 ZNF532Q9HCE3 1301 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 USP17L15C9J2P7 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L13C9JLJ4 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L11C9JVI0 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L18D6R9N7 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L22D6RA61 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L17D6RBQ6 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L19D6RCP7 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L20D6RJB6 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 MAPK4P31152 587 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 USP17L24Q0WX57 530 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 NECAB2Q7Z6G3 386 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
CTNS-209ENST00000574776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.45■□□□□ 0.54
CTNS-209ENST00000574776 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
CTNS-209ENST00000574776 EDC3Q96F86 508 aaKnown RBP18.45■□□□□ 0.54
CTNS-209ENST00000574776 C12orf42Q96LP6 360 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 CRNKL1Q9BZJ0 848 aaKnown RBP18.45■□□□□ 0.54
CTNS-209ENST00000574776 MCM9Q9NXL9 1143 aa18.45■□□□□ 0.54
CTNS-209ENST00000574776 RAB11FIP3O75154 756 aa18.44■□□□□ 0.54
CTNS-209ENST00000574776 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
CTNS-209ENST00000574776 USP14P54578 494 aa18.44■□□□□ 0.54
CTNS-209ENST00000574776 EVX2Q03828 476 aa18.44■□□□□ 0.54
CTNS-209ENST00000574776 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
CTNS-209ENST00000574776 CATSPERGQ6ZRH7 1159 aa18.44■□□□□ 0.54
CTNS-209ENST00000574776 GPR142Q7Z601 462 aa18.44■□□□□ 0.54
CTNS-209ENST00000574776 KIAA1683Q9H0B3 1180 aa18.44■□□□□ 0.54
CTNS-209ENST00000574776 TCRBV5S4A2TA0A5A2 114 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 GUCY1A2P33402 732 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 GABPAQ06546 454 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 SEPT2Q15019 361 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 PLEKHH3Q7Z736 793 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 LCORLQ8N3X6 602 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 SDR42E1Q8WUS8 393 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 SOCS4Q8WXH5 440 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 USP6NLQ92738 828 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 RABGAP1Q9Y3P9 1069 aa18.43■□□□□ 0.54
CTNS-209ENST00000574776 MPHOSPH10O00566 681 aaKnown RBP18.42■□□□□ 0.54
CTNS-209ENST00000574776 CNMDO75829 334 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 PRKAR2AP13861 404 aaKnown RBP18.42■□□□□ 0.54
CTNS-209ENST00000574776 VCAM1P19320 739 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 CCL14Q16627 93 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 SLFNL1Q499Z3 407 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 MORN1Q5T089 497 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 MAP3K21Q5TCX8 1036 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 ANKLE1Q8NAG6 615 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 CWC22Q9HCG8 908 aaKnown RBP18.42■□□□□ 0.54
CTNS-209ENST00000574776 DCP1AQ9NPI6 582 aaPredicted RBP18.42■□□□□ 0.54
CTNS-209ENST00000574776 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
CTNS-209ENST00000574776 RANBP2P49792 3224 aaKnown RBP18.41■□□□□ 0.54
CTNS-209ENST00000574776 CYP2D6P10635 497 aa18.41■□□□□ 0.54
CTNS-209ENST00000574776 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
CTNS-209ENST00000574776 RGS2P41220 211 aa18.41■□□□□ 0.54
CTNS-209ENST00000574776 CACNB2Q08289 660 aaPredicted RBP18.41■□□□□ 0.54
CTNS-209ENST00000574776 TRMT44Q8IYL2 757 aaKnown RBP18.41■□□□□ 0.54
CTNS-209ENST00000574776 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
CTNS-209ENST00000574776 PRO3102Q9H379 93 aa18.41■□□□□ 0.54
CTNS-209ENST00000574776 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
CTNS-209ENST00000574776 ARMT1Q9H993 441 aa18.41■□□□□ 0.54
CTNS-209ENST00000574776 PAG1Q9NWQ8 432 aa18.41■□□□□ 0.54
CTNS-209ENST00000574776 PRKAB2O43741 272 aa18.4■□□□□ 0.54
CTNS-209ENST00000574776 ATP5JP18859 108 aa18.4■□□□□ 0.54
CTNS-209ENST00000574776 MNX1P50219 401 aaPredicted RBP18.4■□□□□ 0.54
CTNS-209ENST00000574776 CCNA1P78396 465 aa18.4■□□□□ 0.54
CTNS-209ENST00000574776 WDR78Q5VTH9 848 aa18.4■□□□□ 0.54
CTNS-209ENST00000574776 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
CTNS-209ENST00000574776 BTBD7Q9P203 1132 aa18.4■□□□□ 0.54
CTNS-209ENST00000574776 STAP2Q9UGK3 403 aa18.4■□□□□ 0.54
CTNS-209ENST00000574776 OGDHLQ9ULD0 1010 aa18.4■□□□□ 0.54
CTNS-209ENST00000574776 A0A1W2PRG0 241 aa18.39■□□□□ 0.53
CTNS-209ENST00000574776 ADD2P35612 726 aa18.39■□□□□ 0.53
CTNS-209ENST00000574776 MAP2K5Q13163 448 aa18.39■□□□□ 0.53
CTNS-209ENST00000574776 SLC44A5Q8NCS7 719 aa18.39■□□□□ 0.53
CTNS-209ENST00000574776 DYNLL2Q96FJ2 89 aa18.39■□□□□ 0.53
CTNS-209ENST00000574776 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
CTNS-209ENST00000574776 MBD4O95243 580 aa18.38■□□□□ 0.53
CTNS-209ENST00000574776 CHGBP05060 677 aa18.38■□□□□ 0.53
CTNS-209ENST00000574776 CCND3P30281 292 aaPredicted RBP18.38■□□□□ 0.53
CTNS-209ENST00000574776 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
CTNS-209ENST00000574776 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
CTNS-209ENST00000574776 C7orf61Q8IZ16 206 aa18.38■□□□□ 0.53
CTNS-209ENST00000574776 HAUS7Q99871 368 aa18.38■□□□□ 0.53
CTNS-209ENST00000574776 C11orf49Q9H6J7 331 aa18.38■□□□□ 0.53
CTNS-209ENST00000574776 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
CTNS-209ENST00000574776 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
CTNS-209ENST00000574776 SPDYE16A6NNV3 312 aaPredicted RBP18.37■□□□□ 0.53
CTNS-209ENST00000574776 PTPREP23469 700 aa18.37■□□□□ 0.53
CTNS-209ENST00000574776 COG2Q14746 738 aa18.37■□□□□ 0.53
CTNS-209ENST00000574776 APBA2Q99767 749 aa18.37■□□□□ 0.53
CTNS-209ENST00000574776 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTNS-209ENST00000574776 SZT2Q5T011 3432 aa18.36■□□□□ 0.53
CTNS-209ENST00000574776 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
CTNS-209ENST00000574776 SMIM22K7EJ46 135 aa18.36■□□□□ 0.53
CTNS-209ENST00000574776 SMARCA5O60264 1052 aaPredicted RBP18.36■□□□□ 0.53
CTNS-209ENST00000574776 DDX60LQ5H9U9 1706 aaKnown RBP18.36■□□□□ 0.53
CTNS-209ENST00000574776 KIAA1755Q5JYT7 1200 aa18.36■□□□□ 0.53
CTNS-209ENST00000574776 LHX8Q68G74 356 aa18.36■□□□□ 0.53
CTNS-209ENST00000574776 TMEM179Q6ZVK1 233 aa18.36■□□□□ 0.53
CTNS-209ENST00000574776 ATP8A2Q9NTI2 1148 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms