RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 EVX2Q03828 476 aa25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 SLFNL1Q499Z3 407 aa25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 C12orf42Q96LP6 360 aa25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 HAUS7Q99871 368 aa25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 DCP1AQ9NPI6 582 aaPredicted RBP25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 PAK6Q9NQU5 681 aaPredicted RBP25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L15C9J2P7 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L13C9JLJ4 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L11C9JVI0 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L18D6R9N7 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L22D6RA61 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L17D6RBQ6 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L19D6RCP7 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L20D6RJB6 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 SMARCA5O60264 1052 aaPredicted RBP25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 MBD4O95243 580 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 CYP2D6P10635 497 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 CYP2B6P20813 491 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 MAPK4P31152 587 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 USP17L24Q0WX57 530 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 KIAA1683Q9H0B3 1180 aa25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 CWC22Q9HCG8 908 aaKnown RBP25.53■■□□□ 1.68
CHRNB1-206ENST00000574054 VCAM1P19320 739 aa25.52■■□□□ 1.68
CHRNB1-206ENST00000574054 ADD2P35612 726 aa25.52■■□□□ 1.68
CHRNB1-206ENST00000574054 GABPAQ06546 454 aa25.52■■□□□ 1.68
CHRNB1-206ENST00000574054 SEPT2Q15019 361 aa25.52■■□□□ 1.68
CHRNB1-206ENST00000574054 Q3C1V9 767 aa25.52■■□□□ 1.68
CHRNB1-206ENST00000574054 NUDT12Q9BQG2 462 aa25.52■■□□□ 1.68
CHRNB1-206ENST00000574054 GUCY1A2P33402 732 aa25.51■■□□□ 1.67
CHRNB1-206ENST00000574054 TRIM32Q13049 653 aa25.51■■□□□ 1.67
CHRNB1-206ENST00000574054 SOCS4Q8WXH5 440 aa25.51■■□□□ 1.67
CHRNB1-206ENST00000574054 PORCNQ9H237 461 aa25.51■■□□□ 1.67
CHRNB1-206ENST00000574054 COLQQ9Y215 455 aaPredicted RBP25.51■■□□□ 1.67
CHRNB1-206ENST00000574054 PRKAB2O43741 272 aa25.5■■□□□ 1.67
CHRNB1-206ENST00000574054 SLC44A5Q8NCS7 719 aa25.5■■□□□ 1.67
CHRNB1-206ENST00000574054 TRIB2Q92519 343 aa25.5■■□□□ 1.67
CHRNB1-206ENST00000574054 POTEEQ6S8J3 1075 aa25.49■■□□□ 1.67
CHRNB1-206ENST00000574054 CATSPERGQ6ZRH7 1159 aa25.49■■□□□ 1.67
CHRNB1-206ENST00000574054 GPR142Q7Z601 462 aa25.49■■□□□ 1.67
CHRNB1-206ENST00000574054 DYNLL2Q96FJ2 89 aa25.49■■□□□ 1.67
CHRNB1-206ENST00000574054 RPAP3Q9H6T3 665 aaPredicted RBP25.49■■□□□ 1.67
CHRNB1-206ENST00000574054 HMX1Q9NP08 348 aaPredicted RBP25.49■■□□□ 1.67
CHRNB1-206ENST00000574054 RABGAP1Q9Y3P9 1069 aa25.49■■□□□ 1.67
CHRNB1-206ENST00000574054 RPTORQ8N122 1335 aa25.48■■□□□ 1.67
CHRNB1-206ENST00000574054 CHGBP05060 677 aa25.48■■□□□ 1.67
CHRNB1-206ENST00000574054 CAPN2P17655 700 aa25.48■■□□□ 1.67
CHRNB1-206ENST00000574054 PLEKHH3Q7Z736 793 aa25.48■■□□□ 1.67
CHRNB1-206ENST00000574054 CRISPLD2Q9H0B8 497 aa25.48■■□□□ 1.67
CHRNB1-206ENST00000574054 ATP8A2Q9NTI2 1148 aa25.48■■□□□ 1.67
CHRNB1-206ENST00000574054 TRIOBPQ9H2D6 2365 aa25.48■■□□□ 1.67
CHRNB1-206ENST00000574054 PLXNB2O15031 1838 aa25.47■■□□□ 1.67
CHRNB1-206ENST00000574054 ZKSCAN1P17029 563 aaPredicted RBP25.47■■□□□ 1.67
CHRNB1-206ENST00000574054 CCNA1P78396 465 aa25.47■■□□□ 1.67
CHRNB1-206ENST00000574054 WDR78Q5VTH9 848 aa25.47■■□□□ 1.67
CHRNB1-206ENST00000574054 SWAP70Q9UH65 585 aa25.47■■□□□ 1.67
CHRNB1-206ENST00000574054 NR2E3Q9Y5X4 410 aa25.47■■□□□ 1.67
CHRNB1-206ENST00000574054 CNMDO75829 334 aa25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 XRCC5P13010 732 aaKnown RBP25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 PRKAR2AP13861 404 aaKnown RBP25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 RGS2P41220 211 aa25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 UBE3CQ15386 1083 aa25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 ZSCAN25Q6NSZ9 544 aa25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 CHRDL2Q6WN34 429 aa25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 AMOTL1Q8IY63 956 aa25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 DDRGK1Q96HY6 314 aa25.46■■□□□ 1.67
CHRNB1-206ENST00000574054 A0A1W2PRG0 241 aa25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 MORN1Q5T089 497 aa25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 TMEM179Q6ZVK1 233 aa25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 TRMT44Q8IYL2 757 aaKnown RBP25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 DIS3LQ8TF46 1054 aaKnown RBP25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 PAWRQ96IZ0 340 aaKnown RBP25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 ECHDC1Q9NTX5 307 aa25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 SLC4A4Q9Y6R1 1079 aa25.45■■□□□ 1.66
CHRNB1-206ENST00000574054 CYP2D7A0A087X1C5 515 aa25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 SPDYE16A6NNV3 312 aaPredicted RBP25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 GLRX3O76003 335 aaKnown RBP25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 USP6NLQ92738 828 aa25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 GPATCH3Q96I76 525 aa25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 APBA2Q99767 749 aa25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 TANGO6Q9C0B7 1094 aa25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 RANBP2P49792 3224 aaKnown RBP25.44■■□□□ 1.66
CHRNB1-206ENST00000574054 EVI5O60447 810 aa25.43■■□□□ 1.66
CHRNB1-206ENST00000574054 AKR1B1P15121 316 aa25.43■■□□□ 1.66
CHRNB1-206ENST00000574054 NECAB2Q7Z6G3 386 aa25.43■■□□□ 1.66
CHRNB1-206ENST00000574054 CLEC10AQ8IUN9 316 aa25.43■■□□□ 1.66
CHRNB1-206ENST00000574054 BTBD7Q9P203 1132 aa25.43■■□□□ 1.66
CHRNB1-206ENST00000574054 USP17L12C9JPN9 530 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 USP17L21D6R901 530 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 ICA1Q05084 483 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 CCL14Q16627 93 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 MAP3K21Q5TCX8 1036 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 C12orf60Q5U649 245 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 TSHZ3Q63HK5 1081 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 LBX2Q6XYB7 198 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 PUS7LQ9H0K6 701 aaKnown RBP25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 DCTPP1Q9H773 170 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 PCDH10Q9P2E7 1040 aa25.42■■□□□ 1.66
CHRNB1-206ENST00000574054 BAZ2AQ9UIF9 1905 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms