RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 ZBTB21Q9ULJ3 1066 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 AGTPBP1Q9UPW5 1226 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 PTPN22Q9Y2R2 807 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 SLC45A1Q9Y2W3 748 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 MYH8P13535 1937 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 ZSWIM8A7E2V4 1837 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 ADGRA2Q96PE1 1338 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 GH2P01242 217 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 CHGBP05060 677 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 PLCD1P51178 756 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 JAG1P78504 1218 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 LACTBP83111 547 aaPredicted RBP10.92□□□□□ -0.66
NDE1-207ENST00000573203 CAP1Q01518 475 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.66
NDE1-207ENST00000573203 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
NDE1-207ENST00000573203 MTMR2Q13614 643 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 SHROOM1Q2M3G4 852 aaPredicted RBP10.92□□□□□ -0.66
NDE1-207ENST00000573203 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
NDE1-207ENST00000573203 TATDN1Q6P1N9 297 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 KBTBD3Q8NAB2 608 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 SMCR8Q8TEV9 937 aaPredicted RBP10.92□□□□□ -0.66
NDE1-207ENST00000573203 GCC1Q96CN9 775 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 DDRGK1Q96HY6 314 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 ARHGAP39Q9C0H5 1083 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 TSHZ2Q9NRE2 1034 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 ATP8A2Q9NTI2 1148 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 TMOD4Q9NZQ9 345 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 PNMA3Q9UL41 463 aa10.92□□□□□ -0.66
NDE1-207ENST00000573203 MGAMO43451 1857 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 PRKAB2O43741 272 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
NDE1-207ENST00000573203 MX1P20591 662 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 PSMC4P43686 418 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 SOX10P56693 466 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 BACE1P56817 501 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 ABCB5Q2M3G0 1257 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 LRRFIP1Q32MZ4 808 aaKnown RBP10.91□□□□□ -0.66
NDE1-207ENST00000573203 SH3D19Q5HYK7 790 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 TREML2Q5T2D2 321 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 CENPQQ7L2Z9 268 aaPredicted RBP10.91□□□□□ -0.66
NDE1-207ENST00000573203 AMOTL1Q8IY63 956 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 OTUD7AQ8TE49 926 aaPredicted RBP10.91□□□□□ -0.66
NDE1-207ENST00000573203 PUS7LQ9H0K6 701 aaKnown RBP10.91□□□□□ -0.66
NDE1-207ENST00000573203 RWDD1Q9H446 243 aaPredicted RBP10.91□□□□□ -0.66
NDE1-207ENST00000573203 CABP5Q9NP86 173 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
NDE1-207ENST00000573203 C19orf81C9J6K1 198 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 USP17L10C9JJH3 530 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 RNF113AO15541 343 aaKnown RBP10.9□□□□□ -0.66
NDE1-207ENST00000573203 FMNL1O95466 1100 aaPredicted RBP10.9□□□□□ -0.66
NDE1-207ENST00000573203 GNRH1P01148 92 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 ZFYP08048 801 aaPredicted RBP10.9□□□□□ -0.66
NDE1-207ENST00000573203 CYP2D6P10635 497 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 BCRP11274 1271 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 OSBPP22059 807 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 SHMT1P34896 483 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 GABPAQ06546 454 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 RAB3GAP1Q15042 981 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 PI4K2BQ8TCG2 481 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 APPBP2Q92624 585 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 FEZ1Q99689 392 aa10.9□□□□□ -0.66
NDE1-207ENST00000573203 HTTP42858 3142 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
NDE1-207ENST00000573203 HOXD10P28358 340 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 RGS19P49795 217 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 PRMT2P55345 433 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 FCGRTP55899 365 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 IRX3P78415 501 aaPredicted RBP10.89□□□□□ -0.67
NDE1-207ENST00000573203 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
NDE1-207ENST00000573203 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 OSBP2Q969R2 916 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 FSD1Q9BTV5 496 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 MFRPQ9BY79 579 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 ASCC2Q9H1I8 757 aaPredicted RBP10.89□□□□□ -0.67
NDE1-207ENST00000573203 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 PTCH2Q9Y6C5 1203 aa10.89□□□□□ -0.67
NDE1-207ENST00000573203 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 USP17L21D6R901 530 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 CTGFP29279 349 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 GCLCP48506 637 aaPredicted RBP10.88□□□□□ -0.67
NDE1-207ENST00000573203 ZYXQ15942 572 aaKnown RBP10.88□□□□□ -0.67
NDE1-207ENST00000573203 SLC9C1Q4G0N8 1177 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 C12orf60Q5U649 245 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 NBPF11Q86T75 865 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 ANKRD13CQ8N6S4 541 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 SLC44A5Q8NCS7 719 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 STRBPQ96SI9 672 aaKnown RBP10.88□□□□□ -0.67
NDE1-207ENST00000573203 SRRDQ9UH36 339 aa10.88□□□□□ -0.67
NDE1-207ENST00000573203 SALL3Q9BXA9 1300 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 GPAA1O43292 621 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 GNAT2P19087 354 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 USP14P54578 494 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 PDE1AP54750 535 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 SEPT2Q15019 361 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 CTR9Q6PD62 1173 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms