RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
RPAIN-212ENST00000573126 FANCGO15287 622 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 ZNF174Q15697 407 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 TMEM139Q8IV31 216 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 LINC00116Q8NCU8 138 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 ENOX1Q8TC92 643 aaKnown RBP12.81□□□□□ -0.36
RPAIN-212ENST00000573126 SYMPKQ92797 1274 aaKnown RBP12.81□□□□□ -0.36
RPAIN-212ENST00000573126 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 TAF1P21675 1872 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 PRPF3O43395 683 aaKnown RBP12.81□□□□□ -0.36
RPAIN-212ENST00000573126 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 PRDX5P30044 214 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 STX17P56962 302 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 MECOMQ03112 1051 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
RPAIN-212ENST00000573126 SMYD4Q8IYR2 804 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-212ENST00000573126 STAMQ92783 540 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 DACH1Q9UI36 760 aa12.81□□□□□ -0.36
RPAIN-212ENST00000573126 MYO1BO43795 1136 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 PPP2R5BQ15173 497 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 SPECC1LQ69YQ0 1117 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 TRIM65Q6PJ69 517 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 ZNF397Q8NF99 534 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-212ENST00000573126 SPATA20Q8TB22 786 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 NSUN4Q96CB9 384 aaKnown RBP12.8□□□□□ -0.36
RPAIN-212ENST00000573126 OGFRQ9NZT2 677 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 THRAP3Q9Y2W1 955 aaKnown RBP12.8□□□□□ -0.36
RPAIN-212ENST00000573126 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 IGSF3O75054 1194 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 CYP2D6P10635 497 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-212ENST00000573126 NPY5RQ15761 445 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 KANK3Q6NY19 840 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 REXO1L1PQ8IX06 675 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 TRIML1Q8N9V2 468 aa12.8□□□□□ -0.36
RPAIN-212ENST00000573126 BAG1Q99933 345 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-212ENST00000573126 DDX41Q9UJV9 622 aaKnown RBP12.8□□□□□ -0.36
RPAIN-212ENST00000573126 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
RPAIN-212ENST00000573126 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 ARHGAP6O43182 974 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 PLCD1P51178 756 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 TMTC3Q6ZXV5 915 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 SRBD1Q8N5C6 995 aaKnown RBP12.79□□□□□ -0.36
RPAIN-212ENST00000573126 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 PPP2R2CQ9Y2T4 447 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 CACNA1SQ13698 1873 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 CCP110O43303 1012 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 CD44P16070 742 aaKnown RBP12.79□□□□□ -0.36
RPAIN-212ENST00000573126 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-212ENST00000573126 CTCFLQ8NI51 663 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-212ENST00000573126 PAGE5Q96GU1 130 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 DCP1AQ9NPI6 582 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-212ENST00000573126 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
RPAIN-212ENST00000573126 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■□□□□ 9.2
RPAIN-212ENST00000573126 DUOX1Q9NRD9 1551 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 ROBO1Q9Y6N7 1651 aa12.79□□□□□ -0.36
RPAIN-212ENST00000573126 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 COBLO75128 1261 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 URI1O94763 535 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-212ENST00000573126 PTGDRQ13258 359 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 TOGARAM2Q6ZUX3 1019 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 PRDM4Q9UKN5 801 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 TEX33O43247 280 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
RPAIN-212ENST00000573126 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 FBXO33Q7Z6M2 555 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-212ENST00000573126 TNFRSF25Q93038 417 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 DESI2Q9BSY9 194 aa12.78□□□□□ -0.36
RPAIN-212ENST00000573126 SRP68Q9UHB9 627 aaKnown RBP12.78□□□□□ -0.36
RPAIN-212ENST00000573126 ZSCAN12O43309 604 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 DDAH1O94760 285 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 FGRP09769 529 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 CALM1P0DP23 149 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 CALM2P0DP24 149 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 CALM3P0DP25 149 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 DMTNQ08495 405 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 TXNRD3Q86VQ6 643 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 CCDC34Q96HJ3 373 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.36
RPAIN-212ENST00000573126 SPATA31A5Q5VU36 1347 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 SPATA31A7Q8IWB4 1347 aa12.77□□□□□ -0.36
RPAIN-212ENST00000573126 TSPY2A6NKD2 308 aa12.77□□□□□ -0.37
RPAIN-212ENST00000573126 ERCC5P28715 1186 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-212ENST00000573126 HIBADHP31937 336 aaKnown RBP12.77□□□□□ -0.37
RPAIN-212ENST00000573126 MCM7P33993 719 aa12.77□□□□□ -0.37
RPAIN-212ENST00000573126 NLRP5P59047 1200 aa12.77□□□□□ -0.37
RPAIN-212ENST00000573126 SLC51AQ86UW1 340 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms