RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 USP17L24Q0WX57 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 NUDT12Q9BQG2 462 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 POTEEQ6S8J3 1075 aa20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 CATSPERGQ6ZRH7 1159 aa20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 TRMT44Q8IYL2 757 aaKnown RBP20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 SOCS4Q8WXH5 440 aa20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 DNAJC2Q99543 621 aaKnown RBP20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.64■□□□□ 0.891e-7■■■□□ 17.2
ATP2A3-212ENST00000572694 PAG1Q9NWQ8 432 aa20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 RABGAP1Q9Y3P9 1069 aa20.64■□□□□ 0.89
ATP2A3-212ENST00000572694 GUCY1A2P33402 732 aa20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 LBX2Q6XYB7 198 aa20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 ANKLE1Q8NAG6 615 aa20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 USP6NLQ92738 828 aa20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 HAUS7Q99871 368 aa20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 HMX1Q9NP08 348 aaPredicted RBP20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 DCP1AQ9NPI6 582 aaPredicted RBP20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 MCM9Q9NXL9 1143 aa20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 NR2E3Q9Y5X4 410 aa20.63■□□□□ 0.89
ATP2A3-212ENST00000572694 ADD2P35612 726 aa20.62■□□□□ 0.89
ATP2A3-212ENST00000572694 ACER1Q8TDN7 264 aa20.62■□□□□ 0.89
ATP2A3-212ENST00000572694 FEZ1Q99689 392 aa20.62■□□□□ 0.89
ATP2A3-212ENST00000572694 BOLA2Q9H3K6 86 aa20.62■□□□□ 0.89
ATP2A3-212ENST00000572694 ATP8A2Q9NTI2 1148 aa20.62■□□□□ 0.89
ATP2A3-212ENST00000572694 DDX60LQ5H9U9 1706 aaKnown RBP20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 PEX10O60683 326 aa20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 CYP2B6P20813 491 aa20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 FXR1P51114 621 aaKnown RBP eCLIP20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 MORN1Q5T089 497 aa20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 MAP3K21Q5TCX8 1036 aa20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 LCORLQ8N3X6 602 aa20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 TRIB2Q92519 343 aa20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 EDC3Q96F86 508 aaKnown RBP20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.61■□□□□ 0.899e-7■■■□□ 16.8
ATP2A3-212ENST00000572694 SWAP70Q9UH65 585 aa20.61■□□□□ 0.89
ATP2A3-212ENST00000572694 CCNA1P78396 465 aa20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 UBE3CQ15386 1083 aa20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 GPR142Q7Z601 462 aa20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 PLEKHH3Q7Z736 793 aa20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 CCAR1Q8IX12 1150 aaKnown RBP20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 SDR42E1Q8WUS8 393 aa20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 PORCNQ9H237 461 aa20.6■□□□□ 0.89
ATP2A3-212ENST00000572694 NAV1Q8NEY1 1877 aa20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 CNMDO75829 334 aa20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 VCAM1P19320 739 aa20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 TRIM32Q13049 653 aa20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 SEPT2Q15019 361 aa20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 ZYXQ15942 572 aaKnown RBP20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 PAWRQ96IZ0 340 aaKnown RBP20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 PAGR1Q9BTK6 254 aa20.59■□□□□ 0.89
ATP2A3-212ENST00000572694 GLRX3O76003 335 aaKnown RBP20.58■□□□□ 0.89
ATP2A3-212ENST00000572694 RGS2P41220 211 aa20.58■□□□□ 0.89
ATP2A3-212ENST00000572694 C20orf194Q5TEA3 1177 aa20.58■□□□□ 0.89
ATP2A3-212ENST00000572694 ARMT1Q9H993 441 aa20.58■□□□□ 0.89
ATP2A3-212ENST00000572694 HOXC10Q9NYD6 342 aa20.58■□□□□ 0.89
ATP2A3-212ENST00000572694 OGDHLQ9ULD0 1010 aa20.58■□□□□ 0.89
ATP2A3-212ENST00000572694 EVI5O60447 810 aa20.57■□□□□ 0.88
ATP2A3-212ENST00000572694 ZSCAN25Q6NSZ9 544 aa20.57■□□□□ 0.88
ATP2A3-212ENST00000572694 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
ATP2A3-212ENST00000572694 CCDC17Q96LX7 622 aa20.57■□□□□ 0.88
ATP2A3-212ENST00000572694 PRO3102Q9H379 93 aa20.57■□□□□ 0.88
ATP2A3-212ENST00000572694 A0A1W2PRG0 241 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 PRKAB2O43741 272 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 EVX2Q03828 476 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 MAP2K5Q13163 448 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 COG2Q14746 738 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 C12orf60Q5U649 245 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 CHRDL2Q6WN34 429 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 RPAP3Q9H6T3 665 aaPredicted RBP20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 DCTPP1Q9H773 170 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 TRIOBPQ9H2D6 2365 aa20.56■□□□□ 0.88
ATP2A3-212ENST00000572694 SLC15A5A6NIM6 579 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 SPDYE16A6NNV3 312 aaPredicted RBP20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 MBD4O95243 580 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 CYP2D6P10635 497 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 PRKAR2AP13861 404 aaKnown RBP20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 ZKSCAN1P17029 563 aaPredicted RBP20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 MNX1P50219 401 aaPredicted RBP20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 CACNB2Q08289 660 aaPredicted RBP20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 APBA2Q99767 749 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 NBPF3Q9H094 633 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 BTBD7Q9P203 1132 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 RBM27Q9P2N5 1060 aaKnown RBP20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 MYH7P12883 1935 aa20.55■□□□□ 0.88
ATP2A3-212ENST00000572694 MPHOSPH10O00566 681 aaKnown RBP20.54■□□□□ 0.88
ATP2A3-212ENST00000572694 HOXC6P09630 235 aa20.54■□□□□ 0.88
ATP2A3-212ENST00000572694 PTPREP23469 700 aa20.54■□□□□ 0.88
ATP2A3-212ENST00000572694 SLFNL1Q499Z3 407 aa20.54■□□□□ 0.88
ATP2A3-212ENST00000572694 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
ATP2A3-212ENST00000572694 ECHDC1Q9NTX5 307 aa20.54■□□□□ 0.88
ATP2A3-212ENST00000572694 TMX2Q9Y320 296 aa20.54■□□□□ 0.88
ATP2A3-212ENST00000572694 BAZ2AQ9UIF9 1905 aaKnown RBP20.53■□□□□ 0.88
ATP2A3-212ENST00000572694 USP17L12C9JPN9 530 aa20.53■□□□□ 0.88
ATP2A3-212ENST00000572694 USP17L21D6R901 530 aa20.53■□□□□ 0.88
ATP2A3-212ENST00000572694 CDK8P49336 464 aa20.53■□□□□ 0.88
ATP2A3-212ENST00000572694 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms