RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 C12orf42Q96LP6 360 aa24.31■■□□□ 1.48
CCDC40-206ENST00000572083 LBHD1Q9BQE6 289 aaPredicted RBP24.31■■□□□ 1.48
CCDC40-206ENST00000572083 PIH1D3Q9NQM4 214 aaKnown RBP24.31■■□□□ 1.48
CCDC40-206ENST00000572083 SPTBN5Q9NRC6 3674 aaKnown RBP24.31■■□□□ 1.48
CCDC40-206ENST00000572083 MYH1P12882 1939 aa24.31■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L15C9J2P7 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L13C9JLJ4 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L11C9JVI0 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L18D6R9N7 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L22D6RA61 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L17D6RBQ6 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L19D6RCP7 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L20D6RJB6 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 CNGA1P29973 690 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 CCNA1P78396 465 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 USP17L24Q0WX57 530 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 ATF7IPQ6VMQ6 1270 aa24.3■■□□□ 1.48
CCDC40-206ENST00000572083 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.3■■□□□ 1.48
CCDC40-206ENST00000572083 DDX20Q9UHI6 824 aaKnown RBP24.3■■□□□ 1.48
CCDC40-206ENST00000572083 POTEB2H3BUK9 544 aa24.29■■□□□ 1.48
CCDC40-206ENST00000572083 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
CCDC40-206ENST00000572083 OS9Q13438 667 aaPredicted RBP24.29■■□□□ 1.48
CCDC40-206ENST00000572083 RAB3GAP1Q15042 981 aa24.29■■□□□ 1.48
CCDC40-206ENST00000572083 MIGA1Q8NAN2 632 aa24.29■■□□□ 1.48
CCDC40-206ENST00000572083 GPR108Q9NPR9 543 aa24.29■■□□□ 1.48
CCDC40-206ENST00000572083 LTBP2Q14767 1821 aa24.28■■□□□ 1.48
CCDC40-206ENST00000572083 SLC15A5A6NIM6 579 aa24.28■■□□□ 1.48
CCDC40-206ENST00000572083 VCAM1P19320 739 aa24.28■■□□□ 1.48
CCDC40-206ENST00000572083 CYP7A1P22680 504 aa24.28■■□□□ 1.48
CCDC40-206ENST00000572083 PTPREP23469 700 aa24.28■■□□□ 1.48
CCDC40-206ENST00000572083 CLUAP1Q96AJ1 413 aa24.28■■□□□ 1.48
CCDC40-206ENST00000572083 BTBD7Q9P203 1132 aa24.28■■□□□ 1.48
CCDC40-206ENST00000572083 CYP2C19P33261 490 aa24.27■■□□□ 1.48
CCDC40-206ENST00000572083 ATP2B2Q01814 1243 aa24.27■■□□□ 1.48
CCDC40-206ENST00000572083 FAM109BQ6ICB4 259 aaPredicted RBP24.27■■□□□ 1.48
CCDC40-206ENST00000572083 TATDN1Q6P1N9 297 aa24.27■■□□□ 1.48
CCDC40-206ENST00000572083 CATSPERGQ6ZRH7 1159 aa24.27■■□□□ 1.48
CCDC40-206ENST00000572083 NPLOC4Q8TAT6 608 aa24.27■■□□□ 1.48
CCDC40-206ENST00000572083 FRAT1Q92837 279 aaPredicted RBP24.27■■□□□ 1.48
CCDC40-206ENST00000572083 IVNS1ABPQ9Y6Y0 642 aa24.27■■□□□ 1.48
CCDC40-206ENST00000572083 PRUNE2Q8WUY3 3088 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 USP5P45974 858 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 USP14P54578 494 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 RTP1P59025 263 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 GRB14Q14449 540 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 TRPV1Q8NER1 839 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 ACER1Q8TDN7 264 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 LPAR1Q92633 364 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 TLR7Q9NYK1 1049 aaKnown RBP24.26■■□□□ 1.47
CCDC40-206ENST00000572083 PRKAG2Q9UGJ0 569 aa24.26■■□□□ 1.47
CCDC40-206ENST00000572083 DNM1LO00429 736 aa24.25■■□□□ 1.47
CCDC40-206ENST00000572083 MSCO60682 206 aa24.25■■□□□ 1.47
CCDC40-206ENST00000572083 IDH1O75874 414 aaKnown RBP24.25■■□□□ 1.47
CCDC40-206ENST00000572083 POLA2Q14181 598 aa24.25■■□□□ 1.47
CCDC40-206ENST00000572083 KIAA1683Q9H0B3 1180 aa24.25■■□□□ 1.47
CCDC40-206ENST00000572083 SERPINB13Q9UIV8 391 aa24.25■■□□□ 1.47
CCDC40-206ENST00000572083 ATP11BQ9Y2G3 1177 aa24.25■■□□□ 1.47
CCDC40-206ENST00000572083 SPDYE16A6NNV3 312 aaPredicted RBP24.24■■□□□ 1.47
CCDC40-206ENST00000572083 IPO8O15397 1037 aaKnown RBP24.24■■□□□ 1.47
CCDC40-206ENST00000572083 HOXC6P09630 235 aa24.24■■□□□ 1.47
CCDC40-206ENST00000572083 ABCB5Q2M3G0 1257 aa24.24■■□□□ 1.47
CCDC40-206ENST00000572083 CERKLQ49MI3 558 aaPredicted RBP24.24■■□□□ 1.47
CCDC40-206ENST00000572083 GJC2Q5T442 439 aaPredicted RBP24.24■■□□□ 1.47
CCDC40-206ENST00000572083 ZNF697Q5TEC3 545 aa24.24■■□□□ 1.47
CCDC40-206ENST00000572083 LBX2Q6XYB7 198 aa24.24■■□□□ 1.47
CCDC40-206ENST00000572083 ZNF512BQ96KM6 892 aaPredicted RBP24.24■■□□□ 1.47
CCDC40-206ENST00000572083 EHD4Q9H223 541 aa24.24■■□□□ 1.47
CCDC40-206ENST00000572083 RPAP3Q9H6T3 665 aaPredicted RBP24.24■■□□□ 1.47
CCDC40-206ENST00000572083 DBNLQ9UJU6 430 aaKnown RBP24.24■■□□□ 1.47
CCDC40-206ENST00000572083 CYBAP13498 195 aa24.23■■□□□ 1.47
CCDC40-206ENST00000572083 MAGEB6Q8N7X4 407 aa24.23■■□□□ 1.47
CCDC40-206ENST00000572083 SURF6O75683 361 aaKnown RBP24.22■■□□□ 1.47
CCDC40-206ENST00000572083 BCAR3O75815 825 aa24.22■■□□□ 1.47
CCDC40-206ENST00000572083 ANO1Q5XXA6 986 aa24.22■■□□□ 1.47
CCDC40-206ENST00000572083 RLFQ13129 1914 aa24.22■■□□□ 1.47
CCDC40-206ENST00000572083 IGSF3O75054 1194 aa24.21■■□□□ 1.47
CCDC40-206ENST00000572083 TMEM57Q8N5G2 664 aa24.21■■□□□ 1.47
CCDC40-206ENST00000572083 SSH3Q8TE77 659 aa24.21■■□□□ 1.47
CCDC40-206ENST00000572083 CCDC8Q9H0W5 538 aaPredicted RBP24.21■■□□□ 1.47
CCDC40-206ENST00000572083 C1orf115Q9H7X2 142 aa24.21■■□□□ 1.47
CCDC40-206ENST00000572083 CABP5Q9NP86 173 aa24.21■■□□□ 1.47
CCDC40-206ENST00000572083 PRDM5Q9NQX1 630 aaPredicted RBP24.21■■□□□ 1.47
CCDC40-206ENST00000572083 ZNF236Q9UL36 1845 aa24.21■■□□□ 1.47
CCDC40-206ENST00000572083 SHMT1P34896 483 aa24.2■■□□□ 1.46
CCDC40-206ENST00000572083 DPP9Q86TI2 863 aa24.2■■□□□ 1.46
CCDC40-206ENST00000572083 NAV1Q8NEY1 1877 aa24.19■■□□□ 1.46
CCDC40-206ENST00000572083 IGHA2P01877 340 aa24.19■■□□□ 1.46
CCDC40-206ENST00000572083 MYCNP04198 464 aaPredicted RBP24.19■■□□□ 1.46
CCDC40-206ENST00000572083 ADORA2AP29274 412 aa24.19■■□□□ 1.46
CCDC40-206ENST00000572083 SHHQ15465 462 aa24.19■■□□□ 1.46
CCDC40-206ENST00000572083 C9orf50Q5SZB4 431 aa24.19■■□□□ 1.46
CCDC40-206ENST00000572083 TTC6Q86TZ1 520 aa24.19■■□□□ 1.46
CCDC40-206ENST00000572083 CERS3Q8IU89 383 aa24.19■■□□□ 1.46
CCDC40-206ENST00000572083 A0A0G2JMZ2 1700 aa24.18■■□□□ 1.46
CCDC40-206ENST00000572083 KBTBD13C9JR72 458 aa24.18■■□□□ 1.46
CCDC40-206ENST00000572083 GUCY1A2P33402 732 aa24.18■■□□□ 1.46
CCDC40-206ENST00000572083 PLCD1P51178 756 aa24.18■■□□□ 1.46
CCDC40-206ENST00000572083 ATP8B2P98198 1209 aa24.18■■□□□ 1.46
CCDC40-206ENST00000572083 SEPT2Q15019 361 aa24.18■■□□□ 1.46
CCDC40-206ENST00000572083 CDX2Q99626 313 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms