RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 Q7L0L9 218 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 LRP2BPQ9P2M1 347 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 MORF4L1Q9UBU8 362 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 PTPRFP10586 1907 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 ALPK3Q96L96 1907 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 A0A0D9SFI3 127 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 SEC24BO95487 1268 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 MECOMQ03112 1051 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 LRRFIP1Q32MZ4 808 aaKnown RBP16.45■□□□□ 0.22
RPAIN-209ENST00000571558 ZSCAN25Q6NSZ9 544 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 DZIP1Q86YF9 867 aaKnown RBP16.45■□□□□ 0.22
RPAIN-209ENST00000571558 NSUN4Q96CB9 384 aaKnown RBP16.45■□□□□ 0.22
RPAIN-209ENST00000571558 DIAPH3Q9NSV4 1193 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 DOCK1Q14185 1865 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 SGSM2O43147 1006 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 SYN1P17600 705 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 SPP2Q13103 211 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 SH3D19Q5HYK7 790 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-209ENST00000571558 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
RPAIN-209ENST00000571558 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 SOCS4Q8WXH5 440 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 OSBP2Q969R2 916 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 COL25A1Q9BXS0 654 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-209ENST00000571558 RAI14Q9P0K7 980 aa16.45■□□□□ 0.22
RPAIN-209ENST00000571558 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
RPAIN-209ENST00000571558 MAST2Q6P0Q8 1798 aa16.44■□□□□ 0.22
RPAIN-209ENST00000571558 MYH7P12883 1935 aa16.44■□□□□ 0.22
RPAIN-209ENST00000571558 COL6A1P12109 1028 aa16.44■□□□□ 0.22
RPAIN-209ENST00000571558 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPAIN-209ENST00000571558 MAGEB6Q8N7X4 407 aa16.44■□□□□ 0.22
RPAIN-209ENST00000571558 APPBP2Q92624 585 aa16.44■□□□□ 0.22
RPAIN-209ENST00000571558 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
RPAIN-209ENST00000571558 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-209ENST00000571558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.222e-7■■□□□ 11.6
RPAIN-209ENST00000571558 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
RPAIN-209ENST00000571558 PHIPQ8WWQ0 1821 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 GPR75-ASB3A0A0A6YYF3 556 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 POTEB2H3BUK9 544 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-209ENST00000571558 ADGRA1Q86SQ6 560 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 TRIB2Q92519 343 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 RAD50Q92878 1312 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 AS3MTQ9HBK9 375 aa16.43■□□□□ 0.22
RPAIN-209ENST00000571558 DDX4Q9NQI0 724 aaKnown RBP16.43■□□□□ 0.22
RPAIN-209ENST00000571558 DOCK3Q8IZD9 2030 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 MROH7-TTC4A0A0A0MT08 1334 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 PFASO15067 1338 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
RPAIN-209ENST00000571558 CAP2P40123 477 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 BTDP43251 543 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 HMGCS2P54868 508 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 PICALMQ13492 652 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 MCMDC2Q4G0Z9 681 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 RUFY2Q8WXA3 655 aa16.42■□□□□ 0.22
RPAIN-209ENST00000571558 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
RPAIN-209ENST00000571558 M0R2C6 588 aa16.41■□□□□ 0.22
RPAIN-209ENST00000571558 CYP7A1P22680 504 aa16.41■□□□□ 0.22
RPAIN-209ENST00000571558 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
RPAIN-209ENST00000571558 TRIM32Q13049 653 aa16.41■□□□□ 0.22
RPAIN-209ENST00000571558 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
RPAIN-209ENST00000571558 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
RPAIN-209ENST00000571558 HERC5Q9UII4 1024 aaKnown RBP16.41■□□□□ 0.22
RPAIN-209ENST00000571558 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
RPAIN-209ENST00000571558 LDHCP07864 332 aa16.4■□□□□ 0.22
RPAIN-209ENST00000571558 MAPK4P31152 587 aa16.4■□□□□ 0.22
RPAIN-209ENST00000571558 RHBDL3P58872 404 aa16.4■□□□□ 0.22
RPAIN-209ENST00000571558 IRX3P78415 501 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-209ENST00000571558 CCDC84Q86UT8 332 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-209ENST00000571558 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
RPAIN-209ENST00000571558 WDR18Q9BV38 432 aa16.4■□□□□ 0.22
RPAIN-209ENST00000571558 MYH2Q9UKX2 1941 aa16.4■□□□□ 0.22
RPAIN-209ENST00000571558 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
RPAIN-209ENST00000571558 CYP2B6P20813 491 aa16.39■□□□□ 0.21
RPAIN-209ENST00000571558 GSTO1P78417 241 aa16.39■□□□□ 0.21
RPAIN-209ENST00000571558 CCDC129Q6ZRS4 1044 aa16.39■□□□□ 0.21
RPAIN-209ENST00000571558 GTF3C2Q8WUA4 911 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-209ENST00000571558 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
RPAIN-209ENST00000571558 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-209ENST00000571558 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
RPAIN-209ENST00000571558 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
RPAIN-209ENST00000571558 FOXP2O15409 715 aa16.38■□□□□ 0.21
RPAIN-209ENST00000571558 SLURP2P0DP57 97 aa16.38■□□□□ 0.21
RPAIN-209ENST00000571558 ZKSCAN1P17029 563 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-209ENST00000571558 BACE1P56817 501 aa16.38■□□□□ 0.21
RPAIN-209ENST00000571558 LBHD1Q9BQE6 289 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-209ENST00000571558 LSG1Q9H089 658 aaKnown RBP16.38■□□□□ 0.21
RPAIN-209ENST00000571558 GINM1Q9NU53 330 aa16.38■□□□□ 0.21
RPAIN-209ENST00000571558 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
RPAIN-209ENST00000571558 GPAA1O43292 621 aa16.37■□□□□ 0.21
RPAIN-209ENST00000571558 ASNSP08243 561 aa16.37■□□□□ 0.21
RPAIN-209ENST00000571558 RGS2P41220 211 aa16.37■□□□□ 0.21
RPAIN-209ENST00000571558 CACNB2Q08289 660 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-209ENST00000571558 LHX8Q68G74 356 aa16.37■□□□□ 0.21
RPAIN-209ENST00000571558 USP6NLQ92738 828 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms