RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
CIITA-205ENST00000571186 FRMPD3Q5JV73 1810 aa17.47■□□□□ 0.39
CIITA-205ENST00000571186 USP17L15C9J2P7 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L13C9JLJ4 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L11C9JVI0 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L18D6R9N7 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L22D6RA61 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L17D6RBQ6 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L19D6RCP7 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L20D6RJB6 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 GLRX3O76003 335 aaKnown RBP17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP5P45974 858 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 ATP8B2P98198 1209 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 USP17L24Q0WX57 530 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 POLA2Q14181 598 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 WDR78Q5VTH9 848 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 POTEEQ6S8J3 1075 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 EDC3Q96F86 508 aaKnown RBP17.46■□□□□ 0.39
CIITA-205ENST00000571186 APBA2Q99767 749 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 RABGAP1Q9Y3P9 1069 aa17.46■□□□□ 0.39
CIITA-205ENST00000571186 IDH1O75874 414 aaKnown RBP17.45■□□□□ 0.38
CIITA-205ENST00000571186 COL6A1P12109 1028 aa17.45■□□□□ 0.38
CIITA-205ENST00000571186 CCNA1P78396 465 aa17.45■□□□□ 0.38
CIITA-205ENST00000571186 MDM2Q00987 491 aaPredicted RBP17.45■□□□□ 0.38
CIITA-205ENST00000571186 MAP2K5Q13163 448 aa17.45■□□□□ 0.38
CIITA-205ENST00000571186 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
CIITA-205ENST00000571186 MFSD14CQ5VZR4 134 aa17.45■□□□□ 0.38
CIITA-205ENST00000571186 MIGA1Q8NAN2 632 aa17.45■□□□□ 0.38
CIITA-205ENST00000571186 SSH3Q8TE77 659 aa17.45■□□□□ 0.38
CIITA-205ENST00000571186 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
CIITA-205ENST00000571186 CCDC8Q9H0W5 538 aaPredicted RBP17.45■□□□□ 0.38
CIITA-205ENST00000571186 IGSF3O75054 1194 aa17.44■□□□□ 0.38
CIITA-205ENST00000571186 MTMR10Q9NXD2 777 aa17.44■□□□□ 0.38
CIITA-205ENST00000571186 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
CIITA-205ENST00000571186 DBNLQ9UJU6 430 aaKnown RBP17.44■□□□□ 0.38
CIITA-205ENST00000571186 CNMDO75829 334 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 CNGA1P29973 690 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 USP14P54578 494 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 CERKLQ49MI3 558 aaPredicted RBP17.43■□□□□ 0.38
CIITA-205ENST00000571186 C20orf194Q5TEA3 1177 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 TATDN1Q6P1N9 297 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 CATSPERGQ6ZRH7 1159 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 C12orf42Q96LP6 360 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 SENP6Q9GZR1 1112 aaPredicted RBP17.43■□□□□ 0.38
CIITA-205ENST00000571186 TLR7Q9NYK1 1049 aaKnown RBP17.43■□□□□ 0.38
CIITA-205ENST00000571186 STXBP5LQ9Y2K9 1186 aa17.43■□□□□ 0.38
CIITA-205ENST00000571186 UNC80Q8N2C7 3258 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 SLC15A5A6NIM6 579 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 PTPREP23469 700 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 TTC6Q86TZ1 520 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 ACER1Q8TDN7 264 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 CABP5Q9NP86 173 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 FLRT1Q9NZU1 646 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 IVNS1ABPQ9Y6Y0 642 aa17.42■□□□□ 0.38
CIITA-205ENST00000571186 ZNFX1Q9P2E3 1918 aaKnown RBP17.41■□□□□ 0.38
CIITA-205ENST00000571186 CERS3Q8IU89 383 aa17.41■□□□□ 0.38
CIITA-205ENST00000571186 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
CIITA-205ENST00000571186 LBHD1Q9BQE6 289 aaPredicted RBP17.41■□□□□ 0.38
CIITA-205ENST00000571186 KIAA1683Q9H0B3 1180 aa17.41■□□□□ 0.38
CIITA-205ENST00000571186 VCAM1P19320 739 aa17.4■□□□□ 0.38
CIITA-205ENST00000571186 ATN1P54259 1190 aaPredicted RBP17.4■□□□□ 0.38
CIITA-205ENST00000571186 MAP3K12Q12852 859 aa17.4■□□□□ 0.38
CIITA-205ENST00000571186 EHD4Q9H223 541 aa17.4■□□□□ 0.38
CIITA-205ENST00000571186 BTBD7Q9P203 1132 aa17.4■□□□□ 0.38
CIITA-205ENST00000571186 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
CIITA-205ENST00000571186 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
CIITA-205ENST00000571186 SMCHD1A6NHR9 2005 aa17.4■□□□□ 0.38
CIITA-205ENST00000571186 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
CIITA-205ENST00000571186 PLCD1P51178 756 aa17.39■□□□□ 0.37
CIITA-205ENST00000571186 NPLOC4Q8TAT6 608 aa17.39■□□□□ 0.37
CIITA-205ENST00000571186 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
CIITA-205ENST00000571186 ANTXR1Q9H6X2 564 aa17.39■□□□□ 0.37
CIITA-205ENST00000571186 MSCO60682 206 aa17.38■□□□□ 0.37
CIITA-205ENST00000571186 MS4A1P11836 297 aa17.38■□□□□ 0.37
CIITA-205ENST00000571186 CYP2C19P33261 490 aa17.38■□□□□ 0.37
CIITA-205ENST00000571186 LBX2Q6XYB7 198 aa17.38■□□□□ 0.37
CIITA-205ENST00000571186 DPP9Q86TI2 863 aa17.38■□□□□ 0.37
CIITA-205ENST00000571186 LPAR1Q92633 364 aa17.38■□□□□ 0.37
CIITA-205ENST00000571186 MYH8P13535 1937 aa17.38■□□□□ 0.37
CIITA-205ENST00000571186 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
CIITA-205ENST00000571186 HOXC6P09630 235 aa17.37■□□□□ 0.37
CIITA-205ENST00000571186 SHMT1P34896 483 aa17.37■□□□□ 0.37
CIITA-205ENST00000571186 GRB14Q14449 540 aa17.37■□□□□ 0.37
CIITA-205ENST00000571186 SEPT2Q15019 361 aa17.37■□□□□ 0.37
CIITA-205ENST00000571186 PRKAG2Q9UGJ0 569 aa17.37■□□□□ 0.37
CIITA-205ENST00000571186 NAV1Q8NEY1 1877 aa17.37■□□□□ 0.37
CIITA-205ENST00000571186 RLFQ13129 1914 aa17.37■□□□□ 0.37
CIITA-205ENST00000571186 MAGEB6P1A0A0J9YX57 407 aa17.36■□□□□ 0.37
CIITA-205ENST00000571186 MPHOSPH10O00566 681 aaKnown RBP17.36■□□□□ 0.37
CIITA-205ENST00000571186 GUCY1A2P33402 732 aa17.36■□□□□ 0.37
CIITA-205ENST00000571186 COG2Q14746 738 aa17.36■□□□□ 0.37
CIITA-205ENST00000571186 CEP85Q6P2H3 762 aa17.36■□□□□ 0.37
CIITA-205ENST00000571186 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
CIITA-205ENST00000571186 HOXC10Q9NYD6 342 aa17.36■□□□□ 0.37
CIITA-205ENST00000571186 POTEB2H3BUK9 544 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms