RNA–Protein interactions for RNA: ENST00000571178.1

PAM16-202, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 353 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-202ENST00000571178 GPRC5AQ8NFJ5 357 aa17.6■□□□□ 0.41
PAM16-202ENST00000571178 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
PAM16-202ENST00000571178 PCDH10Q9P2E7 1040 aa17.6■□□□□ 0.41
PAM16-202ENST00000571178 CDK5RAP2Q96SN8 1893 aa17.6■□□□□ 0.41
PAM16-202ENST00000571178 MAST2Q6P0Q8 1798 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 USP17L12C9JPN9 530 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 USP17L21D6R901 530 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 SGPL1O95470 568 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 AKR1B1P15121 316 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 CATSPERGQ6ZRH7 1159 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 PXYLP1Q8TE99 480 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 DPF3Q92784 378 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 FEZ1Q99689 392 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 CABP5Q9NP86 173 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 GINM1Q9NU53 330 aa17.59■□□□□ 0.41
PAM16-202ENST00000571178 USP17L15C9J2P7 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L13C9JLJ4 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L11C9JVI0 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L18D6R9N7 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L22D6RA61 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L17D6RBQ6 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L19D6RCP7 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L20D6RJB6 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 USP17L24Q0WX57 530 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 CCL14Q16627 93 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 KIAA1683Q9H0B3 1180 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
PAM16-202ENST00000571178 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 BTBD7Q9P203 1132 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.4
PAM16-202ENST00000571178 ATAD5Q96QE3 1844 aa17.57■□□□□ 0.4
PAM16-202ENST00000571178 VCAM1P19320 739 aa17.57■□□□□ 0.4
PAM16-202ENST00000571178 ERVK-9P63128 1117 aa17.57■□□□□ 0.4
PAM16-202ENST00000571178 ERVK-24P63145 666 aa17.57■□□□□ 0.4
PAM16-202ENST00000571178 C12orf60Q5U649 245 aa17.57■□□□□ 0.4
PAM16-202ENST00000571178 CERS3Q8IU89 383 aa17.57■□□□□ 0.4
PAM16-202ENST00000571178 DIS3LQ8TF46 1054 aaKnown RBP17.57■□□□□ 0.4
PAM16-202ENST00000571178 TRIB2Q92519 343 aa17.57■□□□□ 0.4
PAM16-202ENST00000571178 RPAP3Q9H6T3 665 aaPredicted RBP17.57■□□□□ 0.4
PAM16-202ENST00000571178 COLQQ9Y215 455 aaPredicted RBP17.57■□□□□ 0.4
PAM16-202ENST00000571178 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
PAM16-202ENST00000571178 CDK8P49336 464 aa17.56■□□□□ 0.4
PAM16-202ENST00000571178 HABP4Q5JVS0 413 aaKnown RBP17.56■□□□□ 0.4
PAM16-202ENST00000571178 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
PAM16-202ENST00000571178 OSBP2Q969R2 916 aa17.56■□□□□ 0.4
PAM16-202ENST00000571178 C12orf42Q96LP6 360 aa17.56■□□□□ 0.4
PAM16-202ENST00000571178 STRBPQ96SI9 672 aaKnown RBP17.56■□□□□ 0.4
PAM16-202ENST00000571178 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
PAM16-202ENST00000571178 UBE3CQ15386 1083 aa17.55■□□□□ 0.4
PAM16-202ENST00000571178 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
PAM16-202ENST00000571178 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
PAM16-202ENST00000571178 USP6NLQ92738 828 aa17.55■□□□□ 0.4
PAM16-202ENST00000571178 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.55■□□□□ 0.44e-6■■□□□ 12.4
PAM16-202ENST00000571178 PAK6Q9NQU5 681 aaPredicted RBP17.55■□□□□ 0.4
PAM16-202ENST00000571178 ATP8A2Q9NTI2 1148 aa17.55■□□□□ 0.4
PAM16-202ENST00000571178 FOCADQ5VW36 1801 aa17.55■□□□□ 0.4
PAM16-202ENST00000571178 LOC285556D6RIA3 1793 aa17.55■□□□□ 0.4
PAM16-202ENST00000571178 MYH1P12882 1939 aa17.55■□□□□ 0.4
PAM16-202ENST00000571178 MGAMO43451 1857 aa17.54■□□□□ 0.4
PAM16-202ENST00000571178 FARP2O94887 1054 aaPredicted RBP17.54■□□□□ 0.4
PAM16-202ENST00000571178 RRP1P56182 461 aaKnown RBP17.54■□□□□ 0.4
PAM16-202ENST00000571178 MORN1Q5T089 497 aa17.54■□□□□ 0.4
PAM16-202ENST00000571178 TMED8Q6PL24 325 aaPredicted RBP17.54■□□□□ 0.4
PAM16-202ENST00000571178 GPR142Q7Z601 462 aa17.54■□□□□ 0.4
PAM16-202ENST00000571178 PLEKHH3Q7Z736 793 aa17.54■□□□□ 0.4
PAM16-202ENST00000571178 PAWRQ96IZ0 340 aaKnown RBP17.54■□□□□ 0.4
PAM16-202ENST00000571178 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
PAM16-202ENST00000571178 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.54■□□□□ 0.4
PAM16-202ENST00000571178 FLRT1Q9NZU1 646 aa17.54■□□□□ 0.4
PAM16-202ENST00000571178 GSG1L2A8MUP6 293 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 M0R2C6 588 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 ATP2B2Q01814 1243 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 CACNB2Q08289 660 aaPredicted RBP17.53■□□□□ 0.4
PAM16-202ENST00000571178 WDR78Q5VTH9 848 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 NUDT12Q9BQG2 462 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.53■□□□□ 0.4
PAM16-202ENST00000571178 CRISPLD2Q9H0B8 497 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 RABGAP1Q9Y3P9 1069 aa17.53■□□□□ 0.4
PAM16-202ENST00000571178 SPDYE16A6NNV3 312 aaPredicted RBP17.52■□□□□ 0.4
PAM16-202ENST00000571178 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
PAM16-202ENST00000571178 HMGCRP04035 888 aa17.52■□□□□ 0.4
PAM16-202ENST00000571178 CCND3P30281 292 aaPredicted RBP17.52■□□□□ 0.4
PAM16-202ENST00000571178 MNX1P50219 401 aaPredicted RBP17.52■□□□□ 0.4
PAM16-202ENST00000571178 USP14P54578 494 aa17.52■□□□□ 0.4
PAM16-202ENST00000571178 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.4
PAM16-202ENST00000571178 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.4
PAM16-202ENST00000571178 MINDY4BA8MYZ0 360 aa17.51■□□□□ 0.39
PAM16-202ENST00000571178 EEF2P13639 858 aaKnown RBP17.51■□□□□ 0.39
PAM16-202ENST00000571178 PRKAR2AP13861 404 aaKnown RBP17.51■□□□□ 0.39
PAM16-202ENST00000571178 MAPK4P31152 587 aa17.51■□□□□ 0.39
PAM16-202ENST00000571178 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
PAM16-202ENST00000571178 C16orf86Q6ZW13 317 aa17.51■□□□□ 0.39
PAM16-202ENST00000571178 KBTBD3Q8NAB2 608 aa17.51■□□□□ 0.39
PAM16-202ENST00000571178 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
PAM16-202ENST00000571178 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
PAM16-202ENST00000571178 CEP290O15078 2479 aa17.5■□□□□ 0.39
PAM16-202ENST00000571178 COG2Q14746 738 aa17.5■□□□□ 0.39
PAM16-202ENST00000571178 CHRDL2Q6WN34 429 aa17.5■□□□□ 0.39
PAM16-202ENST00000571178 PI4K2BQ8TCG2 481 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms