RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PAG1Q9NWQ8 432 aa14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 TMOD4Q9NZQ9 345 aa14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 SERPINB13Q9UIV8 391 aa14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 HOXB3P14651 431 aaPredicted RBP14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 ATP5JP18859 108 aa14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 BACE1P56817 501 aa14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 PRKCZQ05513 592 aa14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 PDE4DIPQ5VU43 2346 aa14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 ANKRD13CQ8N6S4 541 aa14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 EDC3Q96F86 508 aaKnown RBP14.96□□□□□ -0.01
CTDNEP1-205ENST00000570828 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.96□□□□□ -0.014e-6■□□□□ 11.1
CTDNEP1-205ENST00000570828 MKI67P46013 3256 aaKnown RBP14.96□□□□□ -0.02
CTDNEP1-205ENST00000570828 ZSWIM8A7E2V4 1837 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 SIPA1L1O43166 1804 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 TNPO2O14787 897 aaKnown RBP14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 GH2P01242 217 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 POLR3DP05423 398 aaPredicted RBP14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 GRK4P32298 578 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 IRX3P78415 501 aaPredicted RBP14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 JAG1P78504 1218 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 FAM110CQ1W6H9 321 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 SHROOM1Q2M3G4 852 aaPredicted RBP14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 ZNF710Q8N1W2 664 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 HAUS7Q99871 368 aa14.95□□□□□ -0.02
CTDNEP1-205ENST00000570828 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 TCRBV5S4A2TA0A5A2 114 aa14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 C19orf81C9J6K1 198 aa14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 USP17L10C9JJH3 530 aa14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 SMARCA5O60264 1052 aaPredicted RBP14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 EN2P19622 333 aaPredicted RBP14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 FEZ1Q99689 392 aa14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 ASCC2Q9H1I8 757 aaPredicted RBP14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 MCM9Q9NXL9 1143 aa14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 MYO5AQ9Y4I1 1855 aaKnown RBP14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 FOCADQ5VW36 1801 aa14.94□□□□□ -0.02
CTDNEP1-205ENST00000570828 HOXB1P14653 301 aaPredicted RBP14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 ADD2P35612 726 aa14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 CERKLQ49MI3 558 aaPredicted RBP14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 PRPF38BQ5VTL8 546 aaKnown RBP14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 TATDN1Q6P1N9 297 aa14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 LCORLQ8N3X6 602 aa14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 COA7Q96BR5 231 aa14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 GPATCH3Q96I76 525 aa14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 BIN2Q9UBW5 565 aaPredicted RBP14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 PTPRFP10586 1907 aa14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 LOC285556D6RIA3 1793 aa14.93□□□□□ -0.02
CTDNEP1-205ENST00000570828 KIAA0100Q14667 2235 aaKnown RBP14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 MBD4O95243 580 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 FLT3LGP49771 235 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 PLCD1P51178 756 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 UBXN2AP68543 259 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 RAB3GAP1Q15042 981 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 ABCB5Q2M3G0 1257 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 ZSCAN25Q6NSZ9 544 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 ARMT1Q9H993 441 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 CABP5Q9NP86 173 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 ECHDC1Q9NTX5 307 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 GABRQQ9UN88 632 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 CDK5RAP2Q96SN8 1893 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 ATAD5Q96QE3 1844 aa14.92□□□□□ -0.02
CTDNEP1-205ENST00000570828 HOXA7P31268 230 aaPredicted RBP14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 SHMT1P34896 483 aa14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 UBE3CQ15386 1083 aa14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 MTFR1Q15390 333 aa14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 USP17L2Q6R6M4 530 aa14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 DCTPP1Q9H773 170 aa14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 DCP1AQ9NPI6 582 aaPredicted RBP14.91□□□□□ -0.02
CTDNEP1-205ENST00000570828 RBBP6Q7Z6E9 1792 aaKnown RBP14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 ADCY3O60266 1144 aa14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 USP14P54578 494 aa14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 HERVK_113P62684 666 aa14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 ZYXQ15942 572 aaKnown RBP14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 AMOTL1Q8IY63 956 aa14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 ATP8A2Q9NTI2 1148 aa14.9□□□□□ -0.02
CTDNEP1-205ENST00000570828 DDX60LQ5H9U9 1706 aaKnown RBP14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 MPHOSPH10O00566 681 aaKnown RBP14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 CCL5P13501 91 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 GABPAQ06546 454 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 IRF5Q13568 498 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 SLFNL1Q499Z3 407 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 NKX2-3Q8TAU0 364 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 GTF3C2Q8WUA4 911 aaPredicted RBP14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 KIAA1683Q9H0B3 1180 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 EMILIN3Q9NT22 766 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 MORF4L1Q9UBU8 362 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 SWAP70Q9UH65 585 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
CTDNEP1-205ENST00000570828 PRKAB2O43741 272 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 INHAP05111 366 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 CYP2D6P10635 497 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 ELNP15502 786 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 TSHZ3Q63HK5 1081 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 GPRC5AQ8NFJ5 357 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 PXYLP1Q8TE99 480 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 C12orf42Q96LP6 360 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms